RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 INPPL1O15357 1258 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 SNX3O60493 162 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 ASMTLO95671 621 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 USP17L7P0C7H9 530 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 HOXD10P28358 340 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 BRCC3P46736 316 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 HCAR3P49019 387 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 ZNF135P52742 658 aaPredicted RBP17.25■□□□□ 0.35
SAMM50-201ENST00000350028 WDR4P57081 412 aaKnown RBP17.25■□□□□ 0.35
SAMM50-201ENST00000350028 SARNPP82979 210 aaKnown RBP17.25■□□□□ 0.35
SAMM50-201ENST00000350028 CDK16Q00536 496 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 MAPRE1Q15691 268 aaKnown RBP17.25■□□□□ 0.35
SAMM50-201ENST00000350028 ARL13BQ3SXY8 428 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 NUGGCQ68CJ6 796 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 PDZD4Q76G19 769 aaPredicted RBP17.25■□□□□ 0.35
SAMM50-201ENST00000350028 GPRIN1Q7Z2K8 1008 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 ZNF598Q86UK7 904 aaKnown RBP17.25■□□□□ 0.35
SAMM50-201ENST00000350028 THEM5Q8N1Q8 247 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 SPATA13Q96N96 652 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 TGS1Q96RS0 853 aaKnown RBP17.25■□□□□ 0.35
SAMM50-201ENST00000350028 KDM4CQ9H3R0 1056 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 ACTR5Q9H9F9 607 aaPredicted RBP17.25■□□□□ 0.35
SAMM50-201ENST00000350028 XAB2Q9HCS7 855 aaKnown RBP17.25■□□□□ 0.35
SAMM50-201ENST00000350028 FBXW11Q9UKB1 542 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 RAD54BQ9Y620 910 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 IKBKGQ9Y6K9 419 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 TCRBV9S1A1TA0A576 114 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 PPP1R12AO14974 1030 aaPredicted RBP17.24■□□□□ 0.35
SAMM50-201ENST00000350028 CREB3O43889 395 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 TYROBPO43914 113 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 MFSD11O43934 449 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 AVILO75366 819 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 NCAM1P13591 858 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 TYMPP19971 482 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 MAGEA3P43357 314 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 GLUD2P49448 558 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 ACLYP53396 1101 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 CACNA2D1P54289 1103 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 MTM1Q13496 603 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 DPYSQ14117 519 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 PRKD1Q15139 912 aaPredicted RBP17.24■□□□□ 0.35
SAMM50-201ENST00000350028 LACTB2Q53H82 288 aaPredicted RBP17.24■□□□□ 0.35
SAMM50-201ENST00000350028 ANKRD20A2Q5SQ80 823 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 SYCP2LQ5T4T6 812 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 ANKRD20A1Q5TYW2 823 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 ANKRD20A3Q5VUR7 823 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 PM20D1Q6GTS8 502 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 RFX8Q6ZV50 586 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 C4orf33Q8N1A6 199 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 MZB1Q8WU39 189 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 LRRN4Q8WUT4 740 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 SLC44A1Q8WWI5 657 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 RSPH1Q8WYR4 309 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 GRAMD1AQ96CP6 724 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 WDR6Q9NNW5 1121 aaKnown RBP17.24■□□□□ 0.35
SAMM50-201ENST00000350028 TRMT13Q9NUP7 481 aaKnown RBP17.24■□□□□ 0.35
SAMM50-201ENST00000350028 TMEM30AQ9NV96 361 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 FGFR1OP2Q9NVK5 253 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 ZC3H7BQ9UGR2 993 aaKnown RBP17.24■□□□□ 0.35
SAMM50-201ENST00000350028 INPP5FQ9Y2H2 1132 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 MFHAS1Q9Y4C4 1052 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 CCT8L1PA6NM43 557 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 I3L4J1 428 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 DCLK1O15075 740 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 FSBPO95073 299 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 ZWINTO95229 277 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 OAS1P00973 400 aaKnown RBP17.24■□□□□ 0.35
SAMM50-201ENST00000350028 VAV1P15498 845 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 TAC1P20366 129 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 CA4P22748 312 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 RABGGTBP53611 331 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 MAP3K21Q5TCX8 1036 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 RGS9BPQ6ZS82 235 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 AGGF1Q8N302 714 aaeCLIP17.24■□□□□ 0.351e-6■■■■■ 49.1
SAMM50-201ENST00000350028 CFAP36Q96G28 342 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 SUSD3Q96L08 255 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 PKMYT1Q99640 499 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 TRIM62Q9BVG3 475 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 KIF9Q9HAQ2 790 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 DMAP1Q9NPF5 467 aaPredicted RBP17.24■□□□□ 0.35
SAMM50-201ENST00000350028 TMPRSS4Q9NRS4 437 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 SRRDQ9UH36 339 aa17.24■□□□□ 0.35
SAMM50-201ENST00000350028 USP15Q9Y4E8 981 aaPredicted RBP17.24■□□□□ 0.35
SAMM50-201ENST00000350028 OPHN1O60890 802 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 CPP00450 1065 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 INHBAP08476 426 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 MLNP12872 115 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 KRT4P19013 534 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 IBSPP21815 317 aaPredicted RBP17.23■□□□□ 0.35
SAMM50-201ENST00000350028 LIG3P49916 1009 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 SEMA3BQ13214 749 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 KBTBD12Q3ZCT8 623 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 OVOS1Q6IE37 1185 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 BEND5Q7L4P6 421 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 BHLHA9Q7RTU4 235 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 CCT6BQ92526 530 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 SIGLEC10Q96LC7 697 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 PAIP2Q9BPZ3 127 aaKnown RBP17.23■□□□□ 0.35
SAMM50-201ENST00000350028 PLCD4Q9BRC7 762 aa17.23■□□□□ 0.35
SAMM50-201ENST00000350028 EIF2B3Q9NR50 452 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms