RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 MATKP42679 507 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 KIR2DL1P43626 348 aaPredicted RBP22.97■■□□□ 1.27
SNX3-202ENST00000349379 MRPS21P82921 87 aaKnown RBP22.97■■□□□ 1.27
SNX3-202ENST00000349379 CDK17Q00537 523 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 PTP4A2Q12974 167 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 PPP2R5DQ14738 602 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 CLEC16AQ2KHT3 1053 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 C2CD6Q53TS8 623 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 OTUD1Q5VV17 481 aaPredicted RBP22.97■■□□□ 1.27
SNX3-202ENST00000349379 E4F1Q66K89 784 aaPredicted RBP22.97■■□□□ 1.27
SNX3-202ENST00000349379 NADSYN1Q6IA69 706 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 ARCQ7LC44 396 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 ZBTB44Q8NCP5 570 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 NT5C3BQ969T7 300 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 NPY6RQ99463 290 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 AGPAT1Q99943 283 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 FAM126AQ9BYI3 521 aaPredicted RBP22.97■■□□□ 1.27
SNX3-202ENST00000349379 TMEM59LQ9UK28 342 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 SLC27A6Q9Y2P4 619 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 STARD13Q9Y3M8 1113 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 CYBBP04839 570 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 HOXD9P28356 352 aaPredicted RBP22.96■■□□□ 1.27
SNX3-202ENST00000349379 SLC6A4P31645 630 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 PRKCIP41743 596 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 SLC11A2P49281 568 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 GSCP56915 257 aaPredicted RBP22.96■■□□□ 1.27
SNX3-202ENST00000349379 MPPE1Q53F39 396 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 FAM102AQ5T9C2 384 aaPredicted RBP22.96■■□□□ 1.27
SNX3-202ENST00000349379 SYT13Q7L8C5 426 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 PHF13Q86YI8 300 aaPredicted RBP22.96■■□□□ 1.27
SNX3-202ENST00000349379 BHMTQ93088 406 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 ACDQ96AP0 544 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 NUP58Q9BVL2 599 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 ADAM33Q9BZ11 813 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 RRN3Q9NYV6 651 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 IFNKQ9P0W0 207 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 HCN2Q9UL51 889 aa22.96■■□□□ 1.27
SNX3-202ENST00000349379 MYO15AQ9UKN7 3530 aa22.95■■□□□ 1.27
SNX3-202ENST00000349379 FAM170AA1A519 330 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 KCNU1A8MYU2 1149 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 DGKGP49619 791 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 HSF5Q4G112 596 aaPredicted RBP22.95■■□□□ 1.26
SNX3-202ENST00000349379 ZC3H12AQ5D1E8 599 aaKnown RBP22.95■■□□□ 1.26
SNX3-202ENST00000349379 PIK3R6Q5UE93 754 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 TRNP1Q6NT89 227 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 MMS22LQ6ZRQ5 1243 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 DOCK4Q8N1I0 1966 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 SLC30A5Q8TAD4 765 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 KCNV2Q8TDN2 545 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 PGAP3Q96FM1 320 aaPredicted RBP22.95■■□□□ 1.26
SNX3-202ENST00000349379 C11orf70Q9BRQ4 267 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 SLC2A11Q9BYW1 496 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 FAM204AQ9H8W3 233 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.95■■□□□ 1.26
SNX3-202ENST00000349379 DDIT4Q9NX09 232 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 ZSCAN32Q9NX65 697 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 CALCOCO1Q9P1Z2 691 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 CLEC4EQ9ULY5 219 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 PCDHGA2Q9Y5H1 932 aa22.95■■□□□ 1.26
SNX3-202ENST00000349379 MUC22E2RYF6 1773 aaPredicted RBP22.94■■□□□ 1.26
SNX3-202ENST00000349379 GOLGA6L7A0A1B0GV03 622 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 A0A1W2PQJ5 194 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 TBC1D3BA6NDS4 549 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 LILRB5O75023 590 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 APOEP02649 317 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 GBP1P32455 592 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 FLT3P36888 993 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 SGSHP51688 502 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 SEC13P55735 322 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 C2orf27AQ580R0 203 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 MPP7Q5T2T1 576 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 BNIPLQ7Z465 357 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 DDI1Q8WTU0 396 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.94■■□□□ 1.26
SNX3-202ENST00000349379 XPO7Q9UIA9 1087 aaKnown RBP22.94■■□□□ 1.26
SNX3-202ENST00000349379 SPAG17Q6Q759 2223 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 CKAP5Q14008 2032 aa22.94■■□□□ 1.26
SNX3-202ENST00000349379 PRRT4C9JH25 899 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 TSPAN3O60637 253 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 HOXC13P31276 330 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 NSFP46459 744 aaKnown RBP22.93■■□□□ 1.26
SNX3-202ENST00000349379 C10orf76Q5T2E6 689 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 EMC10Q5UCC4 262 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 SFMBT2Q5VUG0 894 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 ZC3H14Q6PJT7 736 aaKnown RBP22.93■■□□□ 1.26
SNX3-202ENST00000349379 NUDT18Q6ZVK8 323 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 MON1BQ7L1V2 547 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 IL17RCQ8NAC3 791 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 IQCDQ96DY2 449 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 TMA16Q96EY4 203 aaKnown RBP22.93■■□□□ 1.26
SNX3-202ENST00000349379 BTN2A3PQ96KV6 586 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 PRICKLE1Q96MT3 831 aaPredicted RBP22.93■■□□□ 1.26
SNX3-202ENST00000349379 DDX50Q9BQ39 737 aaKnown RBP22.93■■□□□ 1.26
SNX3-202ENST00000349379 XPO4Q9C0E2 1151 aaKnown RBP22.93■■□□□ 1.26
SNX3-202ENST00000349379 NUCKS1Q9H1E3 243 aaKnown RBP22.93■■□□□ 1.26
SNX3-202ENST00000349379 POLR3BQ9NW08 1133 aaPredicted RBP22.93■■□□□ 1.26
SNX3-202ENST00000349379 STAP1Q9ULZ2 295 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 MMP17Q9ULZ9 603 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 R4GN57 208 aa22.93■■□□□ 1.26
SNX3-202ENST00000349379 DMDP11532 3685 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms