RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 GSSP48637 474 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 SCARA3Q6AZY7 606 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 CBWD2Q8IUF1 395 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 TC2NQ8N9U0 490 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 WNK4Q96J92 1243 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 APOL5Q9BWW9 433 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 FKBP14Q9NWM8 211 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 HEY2Q9UBP5 337 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 SUPT3HB4E1H0 165 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 TOP3BO95985 862 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 GNG2P59768 71 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 PPP4CP60510 307 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 TAB1Q15750 504 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 GARNL3Q5VVW2 1013 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 SLC30A10Q6XR72 485 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 C3orf67Q6ZVT6 689 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 ACOT1Q86TX2 421 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 SYTL1Q8IYJ3 562 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 TAGAPQ8N103 731 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 NUP93Q8N1F7 819 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 ASB12Q8WXK4 309 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 MND1Q9BWT6 205 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 RTFDC1Q9BY42 306 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 SYTL2Q9HCH5 934 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 SAR1AQ9NR31 198 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 PIK3CDO00329 1044 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 HIST1H2AGP0C0S8 130 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 RAG1P15918 1043 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 HIST1H2ADP20671 130 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 SPDYE7PQ495Y7 208 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 HIST1H2AHQ96KK5 128 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 SERPINB12Q96P63 405 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 HIST1H2AJQ99878 128 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 H2AFJQ9BTM1 129 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 MANSC1Q9H8J5 431 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 ADARB2Q9NS39 739 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 QPCTLQ9NXS2 382 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 PKP3Q9Y446 797 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 DIP2CQ9Y2E4 1556 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 FOXP2O15409 715 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 SGO1Q5FBB7 561 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 ZRANB3Q5FWF4 1079 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 ZC3H12BQ5HYM0 836 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 DUS1LQ6P1R4 473 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 KCNK18Q7Z418 384 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 AHI1Q8N157 1196 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 CLEC4FQ8N1N0 589 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 SCFD1Q8WVM8 642 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 ELMO3Q96BJ8 720 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 C8orf48Q96LL4 319 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 ZDHHC15Q96MV8 337 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 C6orf62Q9GZU0 229 aaPredicted RBP11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 THAP2Q9H0W7 228 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 CD274Q9NZQ7 290 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 PFDN2Q9UHV9 154 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 TUBE1Q9UJT0 475 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 PCDHGB4Q9UN71 923 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 ING4Q9UNL4 249 aa11.37□□□□□ -0.59
SMARCE1-202ENST00000348513 B3GAT3O94766 335 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 DDNO94850 711 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 LRG1P02750 347 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 LINGO3P0C6S8 592 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ADSLP30566 484 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 TPTEP56180 551 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 CCDC81Q6ZN84 652 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 PRUNE1Q86TP1 453 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 SNX31Q8N9S9 440 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ALG6Q9Y672 507 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 PMF1-BGLAPU3KQ54 211 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 FAM95CA0A1B0GW59 222 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 SSU72P8A0A1W2PR75 194 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ZSCAN5CA6NGD5 496 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 M0QYT0 321 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 APOL3O95236 402 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ANPEPP15144 967 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 NAMPTP43490 491 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ACADSBP45954 432 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 CUL2Q13617 745 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 SULT1C3Q6IMI6 304 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 MTDHQ86UE4 582 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 MIB1Q86YT6 1006 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 RAB42Q8N4Z0 105 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 FEZF2Q8TBJ5 459 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ZSCAN5AQ9BUG6 496 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ASPSCR1Q9BZE9 553 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 CATSPERBQ9H7T0 1116 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 SLC35C2Q9NQQ7 365 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 EDARQ9UNE0 448 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ZNF263O14978 683 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ENDOD1O94919 500 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 UNC5CO95185 931 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ODC1P11926 461 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ACO1P21399 889 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 TDRD10Q5VZ19 366 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 GPR63Q9BZJ6 419 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 RUBCNLQ9H714 662 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 ENTPD7Q9NQZ7 604 aa11.36□□□□□ -0.59
SMARCE1-202ENST00000348513 FARP2O94887 1054 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms