RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 SPANXN3Q5MJ09 141 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 DPY19L2Q6NUT2 758 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 KBTBD2Q8IY47 623 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 FAM120BQ96EK7 910 aaKnown RBP17.89■□□□□ 0.45
SPAST-202ENST00000345662 TIMMDC1Q9NPL8 285 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 DDIT4Q9NX09 232 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 ANKRD6Q9Y2G4 727 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 C21orf2O43822 256 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 CDC42EP1Q00587 391 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 CCDC149Q6ZUS6 474 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 ARCQ7LC44 396 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 GPRASP2Q96D09 838 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 NMRAL1Q9HBL8 299 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 EURLQ9NYK6 297 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 NAMPTP43490 491 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 SERPINH1P50454 418 aaKnown RBP17.88■□□□□ 0.45
SPAST-202ENST00000345662 MFSD5Q6N075 450 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 C16orf46Q6P387 395 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 TMC7Q7Z402 723 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 ZDHHC13Q8IUH4 622 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 LRRC71Q8N4P6 559 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 EPS8L1Q8TE68 723 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 TBCBQ99426 244 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 STN1Q9H668 368 aaKnown RBP17.88■□□□□ 0.45
SPAST-202ENST00000345662 FBXO6Q9NRD1 293 aaPredicted RBP17.88■□□□□ 0.45
SPAST-202ENST00000345662 CAPN1P07384 714 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 ETS1P14921 441 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 MTMR2Q13614 643 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 BRINP3Q76B58 766 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 ADGRA1Q86SQ6 560 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 UGT2B28Q9BY64 529 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 GGA3Q9NZ52 723 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 KCNK18Q7Z418 384 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 SYTL1Q8IYJ3 562 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 PCDH20Q8N6Y1 951 aaKnown RBP17.88■□□□□ 0.45
SPAST-202ENST00000345662 FIG4Q92562 907 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 MMP19Q99542 508 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 RERGLQ9H628 205 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 WDCPQ9H6R7 721 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 POLG2Q9UHN1 485 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 HS6ST1O60243 411 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 PARNO95453 639 aaKnown RBP17.88■□□□□ 0.45
SPAST-202ENST00000345662 C1DQ13901 141 aaKnown RBP17.88■□□□□ 0.45
SPAST-202ENST00000345662 NFIXQ14938 502 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 POLD3Q15054 466 aaPredicted RBP17.88■□□□□ 0.45
SPAST-202ENST00000345662 MIER2Q8N344 545 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 TTLL6Q8N841 843 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 TADA1Q96BN2 335 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 MCRS1Q96EZ8 462 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 OSBPL11Q9BXB4 747 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 POLR1BQ9H9Y6 1135 aa17.88■□□□□ 0.45
SPAST-202ENST00000345662 R3HDM2Q9Y2K5 976 aaKnown RBP17.88■□□□□ 0.45
SPAST-202ENST00000345662 VPS26AO75436 327 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 ATG7O95352 703 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 PIGNO95427 931 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 CYP1A2P05177 515 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 MGAT1P26572 445 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 RRM2P31350 389 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 PPP3CCP48454 512 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 FRG1Q14331 258 aaKnown RBP17.87■□□□□ 0.45
SPAST-202ENST00000345662 PDZK1Q5T2W1 519 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 KCNMB4Q86W47 210 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 WDR49Q8IV35 697 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 C8orf59Q8N0T1 100 aaPredicted RBP17.87■□□□□ 0.45
SPAST-202ENST00000345662 FITM2Q8N6M3 262 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 SYTL2Q9HCH5 934 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 HBS1LQ9Y450 684 aaKnown RBP17.87■□□□□ 0.45
SPAST-202ENST00000345662 ADGRB2O60241 1585 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 C15orf38-AP3S2A0A0A6YYH1 394 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 NCF1BA6NI72 391 aaPredicted RBP17.87■□□□□ 0.45
SPAST-202ENST00000345662 NCF1CA8MVU1 366 aaPredicted RBP17.87■□□□□ 0.45
SPAST-202ENST00000345662 NCF1P14598 390 aaPredicted RBP17.87■□□□□ 0.45
SPAST-202ENST00000345662 MYL6P60660 151 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 PTPN11Q06124 597 aaPredicted RBP17.87■□□□□ 0.45
SPAST-202ENST00000345662 BROXQ5VW32 411 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 ABRAXAS1Q6UWZ7 409 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 ARPINQ7Z6K5 226 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 CLNKQ7Z7G1 428 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 OR7A2PQ8NGA2 310 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 BORCS5Q969J3 196 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 PHF21BQ96EK2 531 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 ARL8BQ9NVJ2 186 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 ADAM30Q9UKF2 790 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 MAP3K13O43283 966 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 SOAT1P35610 550 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 CD151P48509 253 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 MARCKSL1P49006 195 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 PURAQ00577 322 aaKnown RBP17.87■□□□□ 0.45
SPAST-202ENST00000345662 PERM1Q5SV97 790 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 ECHDC2Q86YB7 292 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 FOPNLQ96NB1 174 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 LIASO43766 372 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 LRPAP1P30533 357 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 NNMTP40261 264 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 EPS8Q12929 822 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 UBAP2LQ14157 1087 aaKnown RBP17.87■□□□□ 0.45
SPAST-202ENST00000345662 STRIP1Q5VSL9 837 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 TRIQKQ629K1 86 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 CDH24Q86UP0 819 aa17.87■□□□□ 0.45
SPAST-202ENST00000345662 RASGEF1CQ8N431 466 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms