RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 USP3Q9Y6I4 520 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 RNF103O00237 685 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 RFPL1O75677 317 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 RPSAP08865 295 aaKnown RBP15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 MAGEA3P43357 314 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 SLC8A3P57103 927 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 PRKD1Q15139 912 aaPredicted RBP15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 SLC25A52Q3SY17 297 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 LGSNQ5TDP6 509 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 OTUD1Q5VV17 481 aaPredicted RBP15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 STRADAQ7RTN6 431 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 CCDC91Q7Z6B0 441 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 LONP2Q86WA8 852 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 CHSY1Q86X52 802 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 SIX6OS1Q8N1H7 587 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 RNF139Q8WU17 664 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 SLC7A6OSQ96CW6 309 aaPredicted RBP15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 PGLYRP2Q96PD5 576 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 TBC1D10AQ9BXI6 508 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 A0A0A0MRY4 1105 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 TRDMT1O14717 391 aaKnown RBP15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 ATP5HO75947 161 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 KCNE1P15382 129 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 TPSB2P20231 275 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 SERPINB3P29508 390 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 AXLP30530 894 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 TPSAB1Q15661 275 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 SPRYD7Q5W111 196 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 NDUFAF2Q8N183 169 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 SPATA13Q96N96 652 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 TACO1Q9BSH4 297 aaKnown RBP15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 DUSP16Q9BY84 665 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 FAM237BA0A1B0GVD1 139 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 ZNF487B1APH4 448 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 KRT38O76015 456 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 NPR3P17342 541 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 PTPN1P18031 435 aaKnown RBP15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 CYP2B6P20813 491 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 OLIG2Q13516 323 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 SEMA5AQ13591 1074 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 NBPF20Q3BBV1 942 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 LRRC39Q96DD0 335 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 KRT82Q9NSB4 513 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 MARCOQ9UEW3 520 aaPredicted RBP15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 ZNF180Q9UJW8 692 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 PLLPQ9Y342 182 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 PCDHA11Q9Y5I1 949 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 HMX2A2RU54 273 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 PTGESO14684 152 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 DGKIO75912 1065 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 KITP10721 976 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 MYL2P10916 166 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 MGAT1P26572 445 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 PSMB4P28070 264 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 AFF1P51825 1210 aaKnown RBP15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 TMPRSS15P98073 1019 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 KIAA0319Q5VV43 1072 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 PAQR9Q6ZVX9 377 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 SLC7A14Q8TBB6 771 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 P2RY11Q96G91 374 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 OLFM3Q96PB7 478 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 XAB2Q9HCS7 855 aaKnown RBP15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 PIGVQ9NUD9 493 aa15.36■□□□□ 0.05
VIPAS39-202ENST00000343765 C17orf102A2RUQ5 167 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 FAM159BA6NKW6 160 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 KCNK1O00180 336 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 CELF2O95319 508 aaKnown RBP15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 ANP32DO95626 131 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 RPL34P49207 117 aaKnown RBP15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 TKTL1P51854 596 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 ADAM17P78536 824 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 DEUP1Q05D60 604 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 CHI3L2Q15782 390 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 CES3Q6UWW8 571 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 CLEC20AQ6ZU45 233 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 TTC7BQ86TV6 843 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 RNF169Q8NCN4 708 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 HNRNPABQ99729 332 aaKnown RBP15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 KCNK13Q9HB14 408 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 NRP1O14786 923 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 CAPN9O14815 690 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 DAB1O75553 588 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 HAUS5O94927 633 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 ZNF865P0CJ78 1059 aaPredicted RBP15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 MAP2K2P36507 400 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 SCNN1AP37088 669 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 PCBP1Q15365 356 aaKnown RBP eCLIP15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 CES4AQ5XG92 561 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 C4orf22Q6V702 233 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 ZCCHC23Q6ZST2 131 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 OXNAD1Q96HP4 312 aaPredicted RBP15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 PRDM12Q9H4Q4 367 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 ARL8BQ9NVJ2 186 aa15.35■□□□□ 0.05
VIPAS39-202ENST00000343765 MKI67P46013 3256 aaKnown RBP15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 FAM72CH0Y354 149 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 H3BRJ5 948 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 I3L4J1 428 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 DLDP09622 509 aaKnown RBP15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 WARSP23381 471 aaKnown RBP15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 MLH1P40692 756 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms