RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 NOMO3P69849 1222 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 RRP1BQ14684 758 aaKnown RBP20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 LRRC8EQ6NSJ5 796 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 TRIM48Q8IWZ4 208 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 LENG9Q96B70 501 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 UBA2Q9UBT2 640 aaPredicted RBP20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 SLC24A2Q9UI40 661 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 SLC45A1Q9Y2W3 748 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 OR6C75A6NL08 312 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 PARNO95453 639 aaKnown RBP20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 POU6F1Q14863 301 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 HIST2H2ACQ16777 129 aaPredicted RBP20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 ZC3H12AQ5D1E8 599 aaKnown RBP20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 HIST2H2AA3Q6FI13 130 aa20.12■□□□□ 0.81
SEMA6C-201ENST00000341697 CFAP73A6NFT4 308 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 EEF1B2P24534 225 aaKnown RBP20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 LSP1P33241 339 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 PRKCZQ05513 592 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 NLRP9Q7RTR0 991 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 KAT2BQ92831 832 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 SYTL2Q9HCH5 934 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 ASAH2Q9NR71 780 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 KLHL2O95198 593 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 IGSF6O95976 241 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 ESRRGP62508 458 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 CRHR2Q13324 411 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 MYO1HQ8N1T3 1032 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 PRKD2Q9BZL6 878 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 RUVBL2Q9Y230 463 aaKnown RBP20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 ZNF862O60290 1169 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 BRCC3P46736 316 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 TRAV19A0A0A6YYK7 116 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 VCLP18206 1134 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 NPY2RP49146 381 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 MRPL1Q9BYD6 325 aaKnown RBP20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 IKZF4Q9H2S9 585 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 OPLAHO14841 1288 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 ERAP2Q6P179 960 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 RGS9BPQ6ZS82 235 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 APBB2Q92870 758 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 GMLQ99445 158 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 STOML1Q9UBI4 398 aa20.11■□□□□ 0.81
SEMA6C-201ENST00000341697 SLC9A3R1O14745 358 aaPredicted RBP20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 TSPAN1O60635 241 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 RPSAP08865 295 aaKnown RBP20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 ACADMP11310 421 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 HDCP19113 662 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 SPDYE7PQ495Y7 208 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 LRRC8DQ7L1W4 858 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 LENG1Q96BZ8 264 aaPredicted RBP20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 PDZD7Q9H5P4 517 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 SEPT3Q9UH03 358 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 SPEF2Q9C093 1822 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 PHRF1Q9P1Y6 1649 aaKnown RBP20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 MOXD2PA6NHM9 499 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 HIC1Q14526 733 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 SGO1Q5FBB7 561 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 C16orf59Q7L2K0 433 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 PTAR1Q7Z6K3 402 aaPredicted RBP20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 C12orf29Q8N999 325 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 TUBGCP4Q9UGJ1 667 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 FAM153AQ9UHL3 310 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 SUPT7LO94864 414 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 RASIP1Q5U651 963 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 CES5AQ6NT32 575 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 OOSP2Q86WS3 158 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 MRPL45Q9BRJ2 306 aaKnown RBP20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 DUSP16Q9BY84 665 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 GGT7Q9UJ14 662 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 ACOT9Q9Y305 439 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 TLL1O43897 1013 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 AP2B1P63010 937 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 FAM35AQ86V20 835 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 LZICQ8WZA0 190 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 ILKAPQ9H0C8 392 aaPredicted RBP20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 CNTNAP1P78357 1384 aa20.1■□□□□ 0.81
SEMA6C-201ENST00000341697 NCANO14594 1321 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 PGM1P36871 562 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 THEGQ9P2T0 379 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 SLC27A5Q9Y2P5 690 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 XPO1O14980 1071 aaKnown RBP20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 TRIM16O95361 564 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 INHAP05111 366 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 TPH1P17752 444 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 MZF1P28698 734 aaPredicted RBP20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 MAP2K2P36507 400 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 ELK3P41970 407 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 SH3BGRP55822 239 aaPredicted RBP20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 NPY5RQ15761 445 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 PPP1R26Q5T8A7 1209 aaPredicted RBP20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 RNF103-CHMP3A0A140T963 221 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 TRPC5OSA6NMA1 111 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 HNRNPH3P31942 346 aaKnown RBP20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 MMP13P45452 471 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 PKN3Q6P5Z2 889 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 PCYOX1LQ8NBM8 494 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 TTPALQ9BTX7 342 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 NOP53Q9NZM5 478 aaKnown RBP20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 BTNL10A8MVZ5 291 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 IGF2BP3O00425 579 aaKnown RBP eCLIP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms