RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 PURAQ00577 322 aaKnown RBP20.77■□□□□ 0.92
SPG7-202ENST00000341316 CLEC20AQ6ZU45 233 aa20.77■□□□□ 0.92
SPG7-202ENST00000341316 LRRC6Q86X45 466 aa20.77■□□□□ 0.92
SPG7-202ENST00000341316 INPP5DQ92835 1189 aa20.77■□□□□ 0.92
SPG7-202ENST00000341316 SLC7A6OSQ96CW6 309 aaPredicted RBP20.77■□□□□ 0.92
SPG7-202ENST00000341316 FAM111AQ96PZ2 611 aa20.77■□□□□ 0.92
SPG7-202ENST00000341316 VPS11Q9H270 941 aa20.77■□□□□ 0.92
SPG7-202ENST00000341316 APOEP02649 317 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 NPR3P17342 541 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 OVGP1Q12889 678 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 IRF5Q13568 498 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 MDH1BQ5I0G3 518 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 DENND5BQ6ZUT9 1274 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 RNF169Q8NCN4 708 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 FAM13CQ8NE31 585 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 GSTCDQ8NEC7 633 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 NT5C3BQ969T7 300 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 TSPAN18Q96SJ8 248 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 MANSC1Q9H8J5 431 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 NPHS2Q9NP85 383 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 MAD1L1Q9Y6D9 718 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 GABRDO14764 452 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 DAB1O75553 588 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 CSH1P0DML2 217 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 CSH2P0DML3 217 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 RARBP10826 455 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 TPSB2P20231 275 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 CCNG1P51959 295 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 TPSAB1Q15661 275 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 FSCN1Q16658 493 aaKnown RBP20.76■□□□□ 0.91
SPG7-202ENST00000341316 TTC39BQ5VTQ0 682 aaPredicted RBP20.76■□□□□ 0.91
SPG7-202ENST00000341316 HEATR6Q6AI08 1181 aaKnown RBP20.76■□□□□ 0.91
SPG7-202ENST00000341316 BNIPLQ7Z465 357 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 HTR3CQ8WXA8 447 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 NPY6RQ99463 290 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 CRTAC1Q9NQ79 661 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 KANSL3Q9P2N6 904 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 NUMBLQ9Y6R0 609 aa20.76■□□□□ 0.91
SPG7-202ENST00000341316 PEX11AO75192 247 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 SEMA5AQ13591 1074 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 C4orf22Q6V702 233 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 LONP2Q86WA8 852 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 TP53INP2Q8IXH6 220 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 NME8Q8N427 588 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 TFB1MQ8WVM0 346 aaKnown RBP20.75■□□□□ 0.91
SPG7-202ENST00000341316 EBNA1BP2Q99848 306 aaKnown RBP20.75■□□□□ 0.91
SPG7-202ENST00000341316 TBC1D10AQ9BXI6 508 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 RNPEPL1Q9HAU8 725 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 TRDMT1O14717 391 aaKnown RBP20.75■□□□□ 0.91
SPG7-202ENST00000341316 NRP1O14786 923 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 EPHB2P29323 1055 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 ARL4AP40617 200 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 MAP3K7CLP57077 242 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 BMPR2Q13873 1038 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 TAF1BQ53T94 588 aaPredicted RBP20.75■□□□□ 0.91
SPG7-202ENST00000341316 RFWD2Q8NHY2 731 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 LRRC39Q96DD0 335 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 CEP41Q9BYV8 373 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 TMEM30AQ9NV96 361 aa20.75■□□□□ 0.91
SPG7-202ENST00000341316 M0QYT0 321 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 FYNP06241 537 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 GM2AP17900 193 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 NOS2P35228 1153 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 NME3Q13232 169 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 NLRP9Q7RTR0 991 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 RNF139Q8WU17 664 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 TTC17Q96AE7 1141 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 TSPYL2Q9H2G4 693 aaPredicted RBP20.74■□□□□ 0.91
SPG7-202ENST00000341316 PIGVQ9NUD9 493 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 ZNF180Q9UJW8 692 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 TIMM13Q9Y5L4 95 aaPredicted RBP20.74■□□□□ 0.91
SPG7-202ENST00000341316 HMX2A2RU54 273 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 AMHP03971 560 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 GNAZP19086 355 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 MLH1P40692 756 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 TAF11Q15544 211 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 TAF1CQ15572 869 aaPredicted RBP20.74■□□□□ 0.91
SPG7-202ENST00000341316 CTU1Q7Z7A3 348 aaKnown RBP20.74■□□□□ 0.91
SPG7-202ENST00000341316 UNC5BQ8IZJ1 945 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 KCTD13Q8WZ19 329 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 WNT8BQ93098 351 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 SENP8Q96LD8 212 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 MED10Q9BTT4 135 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 KATNAL1Q9BW62 490 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 LRRC4Q9HBW1 653 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 ANLNQ9NQW6 1124 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 KRT82Q9NSB4 513 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 MIOSQ9NXC5 875 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 DDX43Q9NXZ2 648 aaKnown RBP20.74■□□□□ 0.91
SPG7-202ENST00000341316 ZFP69BQ9UJL9 534 aa20.74■□□□□ 0.91
SPG7-202ENST00000341316 A0A0A0MRY4 1105 aa20.73■□□□□ 0.91
SPG7-202ENST00000341316 CREB3O43889 395 aa20.73■□□□□ 0.91
SPG7-202ENST00000341316 SKAP2O75563 359 aaPredicted RBP20.73■□□□□ 0.91
SPG7-202ENST00000341316 RFPL1O75677 317 aa20.73■□□□□ 0.91
SPG7-202ENST00000341316 TOMM70O94826 608 aa20.73■□□□□ 0.91
SPG7-202ENST00000341316 IGHA2P01877 340 aa20.73■□□□□ 0.91
SPG7-202ENST00000341316 SNRPAP09012 282 aaKnown RBP20.73■□□□□ 0.91
SPG7-202ENST00000341316 TKTL1P51854 596 aa20.73■□□□□ 0.91
SPG7-202ENST00000341316 CACNA2D1P54289 1103 aa20.73■□□□□ 0.91
SPG7-202ENST00000341316 NBPF20Q3BBV1 942 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms