RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 FBXO11Q86XK2 927 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 RASGRP4Q8TDF6 673 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 SCFD2Q8WU76 684 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 TTC9Q92623 222 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 MCMBPQ9BTE3 642 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 IFIH1Q9BYX4 1025 aaKnown RBP17.44■□□□□ 0.38
CDK11B-201ENST00000340677 TLE6Q9H808 572 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 CYB5R1Q9UHQ9 305 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 FAM172BPA6NC97 362 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 SHOXO15266 292 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 HEXBP07686 556 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 NUP107P57740 925 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 AP3B2Q13367 1082 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 MORC3Q14149 939 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 PPP2R5EQ16537 467 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 UBE2UQ5VVX9 321 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 RWDD4Q6NW29 188 aaKnown RBP17.44■□□□□ 0.38
CDK11B-201ENST00000340677 CNGA4Q8IV77 575 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 POMGNT1Q8WZA1 660 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 ZFRQ96KR1 1074 aaKnown RBP17.44■□□□□ 0.38
CDK11B-201ENST00000340677 RHOBTB2Q9BYZ6 727 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 WNT5BQ9H1J7 359 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 TRIT1Q9H3H1 467 aaKnown RBP17.44■□□□□ 0.38
CDK11B-201ENST00000340677 SMYD3Q9H7B4 428 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 RBM12Q9NTZ6 932 aaKnown RBP17.44■□□□□ 0.38
CDK11B-201ENST00000340677 ADD3Q9UEY8 706 aaKnown RBP17.44■□□□□ 0.38
CDK11B-201ENST00000340677 GNPTGQ9UJJ9 305 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 DIMT1Q9UNQ2 313 aaKnown RBP17.44■□□□□ 0.38
CDK11B-201ENST00000340677 STXBP5LQ9Y2K9 1186 aa17.44■□□□□ 0.38
CDK11B-201ENST00000340677 WDR91A4D1P6 747 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 SSX5O60225 188 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 CDH5P33151 784 aaPredicted RBP17.43■□□□□ 0.38
CDK11B-201ENST00000340677 ABCG1P45844 678 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 SEPHS1P49903 392 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 C6orf163Q5TEZ5 329 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 EPM2AIP1Q7L775 607 aaPredicted RBP17.43■□□□□ 0.38
CDK11B-201ENST00000340677 ECHDC2Q86YB7 292 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 HS6ST3Q8IZP7 471 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 STMN2Q93045 179 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 NCLNQ969V3 563 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 RUNDC3BQ96NL0 473 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 C19orf43Q9BQ61 176 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 CSRNP2Q9H175 543 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 TRPS1Q9UHF7 1281 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 BCAP29Q9UHQ4 241 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 GRID1Q9ULK0 1009 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 PCDHA1Q9Y5I3 950 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 SLC22A1O15245 554 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 ECDO95905 644 aaPredicted RBP17.43■□□□□ 0.38
CDK11B-201ENST00000340677 HMGN1P05114 100 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 PBLDP30039 288 aaPredicted RBP17.43■□□□□ 0.38
CDK11B-201ENST00000340677 IREB2P48200 963 aaKnown RBP17.43■□□□□ 0.38
CDK11B-201ENST00000340677 MRPS5P82675 430 aaKnown RBP17.43■□□□□ 0.38
CDK11B-201ENST00000340677 GALK2Q01415 458 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 OTUD4Q01804 1114 aaKnown RBP17.43■□□□□ 0.38
CDK11B-201ENST00000340677 KIAA1755Q5JYT7 1200 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 GRTP1Q5TC63 336 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 SMYD4Q8IYR2 804 aaPredicted RBP17.43■□□□□ 0.38
CDK11B-201ENST00000340677 PM20D2Q8IYS1 436 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 CDK5RAP1Q96SZ6 601 aaKnown RBP17.43■□□□□ 0.38
CDK11B-201ENST00000340677 NUP88Q99567 741 aaPredicted RBP17.43■□□□□ 0.38
CDK11B-201ENST00000340677 TRIM55Q9BYV6 548 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 MKRN2Q9H000 416 aaKnown RBP17.43■□□□□ 0.38
CDK11B-201ENST00000340677 RSL24D1Q9UHA3 163 aaKnown RBP17.43■□□□□ 0.38
CDK11B-201ENST00000340677 ANGPTL2Q9UKU9 493 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 MAPRE3Q9UPY8 281 aa17.43■□□□□ 0.38
CDK11B-201ENST00000340677 RBBP6Q7Z6E9 1792 aaKnown RBP17.42■□□□□ 0.38
CDK11B-201ENST00000340677 SSC5DA1L4H1 1573 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 DDNO94850 711 aaPredicted RBP17.42■□□□□ 0.38
CDK11B-201ENST00000340677 JAK1P23458 1154 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 MCM7P33993 719 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 CLCN4P51793 760 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 PDK3Q15120 406 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 IQSEC1Q6DN90 963 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 KBTBD7Q8WVZ9 684 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 C17orf62Q9BQA9 187 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 SEC22CQ9BRL7 303 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 CCDC106Q9BWC9 280 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 BRD7Q9NPI1 651 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 KBTBD4Q9NVX7 518 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 ANKMY1Q9P2S6 941 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 MAFBQ9Y5Q3 323 aaPredicted RBP17.42■□□□□ 0.38
CDK11B-201ENST00000340677 A0A1B0GTH6 734 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 ITM2AO43736 263 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 SEMA3DO95025 777 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 C6orf222P0C671 652 aaPredicted RBP17.42■□□□□ 0.38
CDK11B-201ENST00000340677 AFMP43652 599 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 POU6F1Q14863 301 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 FAM83BQ5T0W9 1011 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 TEX47Q8TBZ9 253 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 TBCKQ8TEA7 893 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 WNK4Q96J92 1243 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 TXNDC16Q9P2K2 825 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 ADGRE2Q9UHX3 823 aa17.42■□□□□ 0.38
CDK11B-201ENST00000340677 HNRNPCL2B2RXH8 293 aa17.41■□□□□ 0.38
CDK11B-201ENST00000340677 DDX3XO00571 662 aaKnown RBP eCLIP17.41■□□□□ 0.38
CDK11B-201ENST00000340677 HNRNPCL1O60812 293 aaKnown RBP17.41■□□□□ 0.38
CDK11B-201ENST00000340677 CPB1P15086 417 aa17.41■□□□□ 0.38
CDK11B-201ENST00000340677 HARS2P49590 506 aaKnown RBP17.41■□□□□ 0.38
CDK11B-201ENST00000340677 ACAP2Q15057 778 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms