RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 SLC12A6Q9UHW9 1150 aa18.57■□□□□ 0.56
SDCBP2-201ENST00000339987 MIF4GDA9UHW6 222 aaKnown RBP18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 LATS1O95835 1130 aa18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 CTNNA2P26232 953 aa18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 IL1R2P27930 398 aa18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 GBP2P32456 591 aaPredicted RBP18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 HARS2P49590 506 aaKnown RBP18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 SLC35F6Q8N357 371 aa18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 CELF5Q8N6W0 485 aaKnown RBP18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 SH3RF2Q8TEC5 729 aa18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 BTN2A3PQ96KV6 586 aa18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 HAPLN3Q96S86 360 aa18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 CFAP97Q9P2B7 532 aa18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 EPS15L1Q9UBC2 864 aa18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 LSM7Q9UK45 103 aaKnown RBP18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 FZD10Q9ULW2 581 aa18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 CCL26Q9Y258 94 aa18.56■□□□□ 0.56
SDCBP2-201ENST00000339987 COL6A3P12111 3177 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 E2F8A0AVK6 867 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 CCDC66A2RUB6 948 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 I6L893 689 aaPredicted RBP18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 GREM1O60565 184 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 IRF1P10914 325 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 LAMP2P13473 410 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 CORO1AP31146 461 aaKnown RBP18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 CTNNA1P35221 906 aaKnown RBP18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 GNG11P61952 73 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 SMAD2Q15796 467 aaKnown RBP18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 ZNF77Q15935 545 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 ERMARDQ5T6L9 678 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 ACBD5Q5T8D3 534 aaPredicted RBP18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 MEI1Q5TIA1 1274 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 Q6ZNB5 142 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 NYAP1Q6ZVC0 841 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 HTR3DQ70Z44 454 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 WBP2Q969T9 261 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 E2F7Q96AV8 911 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 SNRNP25Q9BV90 132 aaKnown RBP18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 ANLNQ9NQW6 1124 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 FAM50BQ9Y247 325 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 ZNF510Q9Y2H8 683 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 SH3BP1Q9Y3L3 701 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 PCDHA3Q9Y5H8 950 aa18.55■□□□□ 0.56
SDCBP2-201ENST00000339987 KLKB1P03952 638 aa18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 RARAP10276 462 aa18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 FCARP24071 287 aa18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 EFHC2Q5JST6 749 aa18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 TXNRD3NBQ6F5E7 133 aa18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 ACSF2Q96CM8 615 aaPredicted RBP18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 HES6Q96HZ4 224 aa18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 PHF7Q9BWX1 381 aaPredicted RBP18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 OSBPL2Q9H1P3 480 aa18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 ZWILCHQ9H900 591 aa18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 DDX56Q9NY93 547 aaKnown RBP18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 STOML2Q9UJZ1 356 aa18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 AP4E1Q9UPM8 1137 aa18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 JRKLQ9Y4A0 524 aa18.54■□□□□ 0.56
SDCBP2-201ENST00000339987 ACSL4O60488 711 aa18.53■□□□□ 0.56
SDCBP2-201ENST00000339987 PAGE1O75459 146 aa18.53■□□□□ 0.56
SDCBP2-201ENST00000339987 SLC11A2P49281 568 aa18.53■□□□□ 0.56
SDCBP2-201ENST00000339987 ETF1P62495 437 aaKnown RBP18.53■□□□□ 0.56
SDCBP2-201ENST00000339987 PTCRAQ6ISU1 281 aaPredicted RBP18.53■□□□□ 0.56
SDCBP2-201ENST00000339987 DENND1CQ8IV53 801 aa18.53■□□□□ 0.56
SDCBP2-201ENST00000339987 UBL4BQ8N7F7 174 aa18.53■□□□□ 0.56
SDCBP2-201ENST00000339987 RIN3Q8TB24 985 aa18.53■□□□□ 0.56
SDCBP2-201ENST00000339987 KRT35Q92764 455 aa18.53■□□□□ 0.56
SDCBP2-201ENST00000339987 C1orf74Q96LT6 269 aa18.53■□□□□ 0.56
SDCBP2-201ENST00000339987 ZFP14Q9HCL3 533 aa18.53■□□□□ 0.56
SDCBP2-201ENST00000339987 AGO1Q9UL18 857 aaKnown RBP18.53■□□□□ 0.56
SDCBP2-201ENST00000339987 REV3LO60673 3130 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 MOCS2O96007 188 aaPredicted RBP18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 TUBB4AP04350 444 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 GJC1P36383 396 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 PEX5P50542 639 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 NRG1Q02297 640 aaPredicted RBP18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 RPS6KA1Q15418 735 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 DPYSL2Q16555 572 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 SMTNL2Q2TAL5 461 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 KCNT1Q5JUK3 1230 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 MTSS1LQ765P7 747 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 FAM217AQ8IXS0 508 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 KATNAL2Q8IYT4 538 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 TDRD5Q8NAT2 981 aaKnown RBP18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 RSPRY1Q96DX4 576 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 WDR24Q96S15 920 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 DDX50Q9BQ39 737 aaKnown RBP18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 TLR10Q9BXR5 811 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 TMPRSS4Q9NRS4 437 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 XPO7Q9UIA9 1087 aaKnown RBP18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 PACSIN2Q9UNF0 486 aaPredicted RBP18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 NR2E1Q9Y466 385 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 HS3ST4Q9Y661 456 aa18.52■□□□□ 0.56
SDCBP2-201ENST00000339987 DDX3YO15523 660 aaKnown RBP18.51■□□□□ 0.55
SDCBP2-201ENST00000339987 ECI2O75521 394 aa18.51■□□□□ 0.55
SDCBP2-201ENST00000339987 TNNT1P13805 278 aa18.51■□□□□ 0.55
SDCBP2-201ENST00000339987 VIPR2P41587 438 aa18.51■□□□□ 0.55
SDCBP2-201ENST00000339987 MARCKSL1P49006 195 aa18.51■□□□□ 0.55
SDCBP2-201ENST00000339987 ARSEP51690 589 aa18.51■□□□□ 0.55
SDCBP2-201ENST00000339987 ZNF135P52742 658 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms