RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 SOX13Q9UN79 622 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 PFDN1O60925 122 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 CSH1P0DML2 217 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 CSH2P0DML3 217 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 PARP6Q2NL67 630 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 TMEM259Q4ZIN3 620 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 PTAR1Q7Z6K3 402 aaPredicted RBP11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 AZIN2Q96A70 460 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 ELMO2Q96JJ3 720 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 TNIP3Q96KP6 325 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 ZNF184Q99676 751 aaPredicted RBP11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 PHACTR1Q9C0D0 580 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 THAP1Q9NVV9 213 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 CPSF3Q9UKF6 684 aaKnown RBP11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 AURKCQ9UQB9 309 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 V9GYQ6 96 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 PHLPP1O60346 1717 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 NFASCO94856 1347 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 MAGEA13PA6NCF6 341 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 SPDYE5A6NIY4 337 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 ATP6V1C1P21283 382 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 SKIV2L2P42285 1042 aaKnown RBP11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 ZNF252P-AS1Q0IIN9 211 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 OLIG2Q13516 323 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 FLOT2Q14254 428 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 NOMO1Q15155 1222 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 LPCAT4Q643R3 524 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 LCA5Q86VQ0 697 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 NAT8LQ8N9F0 302 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 MAGEC3Q8TD91 643 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 XPNPEP3Q9NQH7 507 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 PFDN4Q9NQP4 134 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 APPL1Q9UKG1 709 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 MAFBQ9Y5Q3 323 aaPredicted RBP11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 PAPPAQ13219 1627 aa11.4□□□□□ -0.58
SEMA4D-201ENST00000339861 MSCO60682 206 aa11.4□□□□□ -0.59
SEMA4D-201ENST00000339861 ZBTB48P10074 688 aaPredicted RBP11.4□□□□□ -0.59
SEMA4D-201ENST00000339861 TFE3P19532 575 aaPredicted RBP11.4□□□□□ -0.59
SEMA4D-201ENST00000339861 ASPAP45381 313 aa11.4□□□□□ -0.59
SEMA4D-201ENST00000339861 STX1BP61266 288 aa11.4□□□□□ -0.59
SEMA4D-201ENST00000339861 IRX1P78414 480 aaPredicted RBP11.4□□□□□ -0.59
SEMA4D-201ENST00000339861 TMED1Q13445 227 aa11.4□□□□□ -0.59
SEMA4D-201ENST00000339861 LRRC8EQ6NSJ5 796 aa11.4□□□□□ -0.59
SEMA4D-201ENST00000339861 C10orf107Q8IVU9 208 aa11.4□□□□□ -0.59
SEMA4D-201ENST00000339861 ZSCAN18Q8TBC5 510 aaPredicted RBP11.4□□□□□ -0.59
SEMA4D-201ENST00000339861 A0A096LPK6 155 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 MAGEB2O15479 319 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 METTL18O95568 372 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 EDN1P05305 212 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 PDE1CQ14123 709 aaPredicted RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 ULK2Q8IYT8 1036 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 WDTC1Q8N5D0 677 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 PIWIL2Q8TC59 973 aaKnown RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 PABPC5Q96DU9 382 aaKnown RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 SH3GL3Q99963 347 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 PRDM12Q9H4Q4 367 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 SLC5A4Q9NY91 659 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 RUVBL2Q9Y230 463 aaKnown RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 ASB14A6NK59 587 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 XPO1O14980 1071 aaKnown RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 CHADO15335 359 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 TBX10O75333 385 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 AP1G2O75843 785 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 ARIH2O95376 493 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 PGM3O95394 542 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 HMBSP08397 361 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 HOXC6P09630 235 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 RAG1P15918 1043 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 RPS12P25398 132 aaKnown RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 ACVR2BQ13705 512 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 RALGPS1Q5JS13 557 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 CDHR3Q6ZTQ4 885 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 RNF139Q8WU17 664 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 TBCBQ99426 244 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 FRMD8P1Q9BZ68 369 aaPredicted RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 EBF2Q9HAK2 575 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 PTPRHQ9HD43 1115 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 TMPRSS4Q9NRS4 437 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 CYTH4Q9UIA0 394 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 GOLGA4Q13439 2230 aaKnown RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 CNTNAP2Q9UHC6 1331 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 C3orf70A6NLC5 250 aaPredicted RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 GOLGA8CPA6NN73 597 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 PAPOLAP51003 745 aaKnown RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 FOXD4Q12950 439 aaPredicted RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 STILQ15468 1287 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 TRMT5Q32P41 509 aaKnown RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 CELF3Q5SZQ8 465 aaKnown RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 PCDH19Q8TAB3 1148 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 DCAKDQ8WVC6 231 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 EME1Q96AY2 570 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 APBA2Q99767 749 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 EBNA1BP2Q99848 306 aaKnown RBP11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 OMDQ99983 421 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 CYP3A43Q9HB55 503 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 ARHGAP26Q9UNA1 814 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 PLLPQ9Y342 182 aa11.39□□□□□ -0.59
SEMA4D-201ENST00000339861 SOWAHBA6NEL2 793 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 PMM2O15305 246 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms