RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 HOXA10P31260 410 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 EIF3EP60228 445 aaKnown RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 PIGHQ14442 188 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 SPDYE2Q495Y8 402 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 DCAF6Q58WW2 860 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 STXBP5Q5T5C0 1151 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 TMEM270Q6UE05 265 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 OLFML1Q6UWY5 402 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 TIFABQ6ZNK6 161 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 TMEM110Q86TL2 294 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 ARFGAP1Q8N6T3 406 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 NIPA2Q8N8Q9 360 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 C12orf43Q96C57 262 aaKnown RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 ZNF597Q96LX8 424 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 CDRT15Q96T59 188 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 GPATCH1Q9BRR8 931 aaKnown RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 ZC3H7BQ9UGR2 993 aaKnown RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 AGTPBP1Q9UPW5 1226 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 MYRFQ9Y2G1 1151 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 K7EPI3 171 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 ZNF701M0R085 212 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 RIMBP2O15034 1052 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 ZBTB11O95625 1053 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 PTPN1P18031 435 aaKnown RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 KDELR1P24390 212 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 IL1R2P27930 398 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 HMOX2P30519 316 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 CDH15P55291 814 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 SLC10A2Q12908 348 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 CEACAM7Q14002 265 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 ZNF772Q68DY9 489 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 OGFOD2Q6N063 350 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 SLC2A7Q6PXP3 512 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 TRIM50Q86XT4 487 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 CLVS1Q8IUQ0 354 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 TMEM161BQ8NDZ6 487 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 BHLHE22Q8NFJ8 381 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-201ENST00000339754 TBC1D15Q8TC07 691 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 SGF29Q96ES7 293 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 CCDC17Q96LX7 622 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 KLHL32Q96NJ5 620 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 SERPINI1Q99574 410 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 DCUN1D5Q9BTE7 237 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 TEKT3Q9BXF9 490 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 HIPK3Q9H422 1215 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 FAM96AQ9H5X1 160 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 PCDHB4Q9Y5E5 795 aa9.68□□□□□ -0.86
NECAP1-201ENST00000339754 TRIM64CA6NLI5 447 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 GPR25O00155 361 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 PSMD12O00232 456 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-201ENST00000339754 PPEF1O14829 653 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-201ENST00000339754 AIM2O14862 343 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 CHADO15335 359 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 ENTPD3O75355 529 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 ATE1O95260 518 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 APOEP02649 317 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 SERPINE1P05121 402 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 PRKCGP05129 697 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 C21orf59P57076 290 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 SLC25A11Q02978 314 aaKnown RBP9.67□□□□□ -0.86
NECAP1-201ENST00000339754 PPP2R5DQ14738 602 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 PCLAFQ15004 111 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 NRF1Q16656 503 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 SMTNL2Q2TAL5 461 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 ZBED5Q49AG3 693 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 WDR44Q5JSH3 913 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 KCNT1Q5JUK3 1230 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 TRMT10BQ6PF06 316 aaKnown RBP9.67□□□□□ -0.86
NECAP1-201ENST00000339754 DCUN1D2Q6PH85 259 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 CAND1Q86VP6 1230 aaKnown RBP9.67□□□□□ -0.86
NECAP1-201ENST00000339754 MAP4K3Q8IVH8 894 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 DSELQ8IZU8 1212 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 DDHD1Q8NEL9 900 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 HM13Q8TCT9 377 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 CHPT1Q8WUD6 406 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 ZNF341Q9BYN7 854 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 COQ10BQ9H8M1 238 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 APOBEC3GQ9HC16 384 aaKnown RBP9.67□□□□□ -0.86
NECAP1-201ENST00000339754 CNTN6Q9UQ52 1028 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 ARHGEF37A1IGU5 675 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 TMEM150BA6NC51 233 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 DDX39AO00148 427 aaKnown RBP9.67□□□□□ -0.86
NECAP1-201ENST00000339754 PLOD2O00469 737 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 ACOT8O14734 319 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 PLIN3O60664 434 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 CFBP00751 764 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 HLA-DRAP01903 254 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 P4HA1P13674 534 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 HARS2P49590 506 aaKnown RBP9.67□□□□□ -0.86
NECAP1-201ENST00000339754 TMED10P49755 219 aaKnown RBP9.67□□□□□ -0.86
NECAP1-201ENST00000339754 NUMBP49757 651 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 CUL2Q13617 745 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 IKBKEQ14164 716 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 MAP7D1Q3KQU3 841 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 PPP6R3Q5H9R7 873 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-201ENST00000339754 FSCBQ5H9T9 825 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 N4BP2L1Q5TBK1 243 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-201ENST00000339754 LMBRD2Q68DH5 695 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-201ENST00000339754 NIPAL1Q6NVV3 410 aa9.67□□□□□ -0.86
NECAP1-201ENST00000339754 PPP1R2P3Q6NXS1 205 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms