RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 KCNK4Q9NYG8 393 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 HTTP42858 3142 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 USP1O94782 785 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 PENKP01210 267 aaPredicted RBP19.41■□□□□ 0.7
PSPC1-201ENST00000338910 IGHA2P01877 340 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 PABPC4LP0CB38 370 aaKnown RBP19.41■□□□□ 0.7
PSPC1-201ENST00000338910 ADAM17P78536 824 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 PPIL6Q8IXY8 311 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 ST13P4Q8IZP2 240 aaPredicted RBP19.41■□□□□ 0.7
PSPC1-201ENST00000338910 NIPA2Q8N8Q9 360 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 C18orf25Q96B23 403 aaPredicted RBP19.41■□□□□ 0.7
PSPC1-201ENST00000338910 EBF3Q9H4W6 596 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 SNX9Q9Y5X1 595 aa19.41■□□□□ 0.7
PSPC1-201ENST00000338910 hCG_1818297A0A087WSY0 165 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 HAS3O00219 553 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 PIM1P11309 404 aaPredicted RBP19.4■□□□□ 0.7
PSPC1-201ENST00000338910 AKAP5P24588 427 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 NAT8LQ8N9F0 302 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 NXF3Q9H4D5 531 aaKnown RBP19.4■□□□□ 0.7
PSPC1-201ENST00000338910 ZDHHC7Q9NXF8 308 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 TUBGCP4Q9UGJ1 667 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 LRCH4O75427 683 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 BAG2O95816 211 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 HMGCRP04035 888 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 DARSP14868 501 aaKnown RBP19.4■□□□□ 0.7
PSPC1-201ENST00000338910 ETS2P15036 469 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 CYP3A5P20815 502 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 IL1R2P27930 398 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 PTPN7P35236 360 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 INCA1Q0VD86 236 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 FSCN1Q16658 493 aaKnown RBP19.4■□□□□ 0.7
PSPC1-201ENST00000338910 DNAL1Q4LDG9 190 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 TFDP3Q5H9I0 405 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 NOTUMQ6P988 496 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 ADGRG6Q86SQ4 1221 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 NT5DC4Q86YG4 428 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 SLC35B2Q8TB61 432 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 TMEM40Q8WWA1 233 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 THTPAQ9BU02 230 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 NT5C1AQ9BXI3 368 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 PCSK1NQ9UHG2 260 aa19.4■□□□□ 0.7
PSPC1-201ENST00000338910 CITO14578 2027 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 PLCB3Q01970 1234 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 C1orf146Q5VVC0 180 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 RAPH1Q70E73 1250 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 TRPV1Q8NER1 839 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 CYTH2Q99418 400 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 MRPL45Q9BRJ2 306 aaKnown RBP19.39■□□□□ 0.69
PSPC1-201ENST00000338910 PLEKHA5Q9HAU0 1116 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 TAGLN3Q9UI15 199 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 TSPAN16Q9UKR8 245 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 TMCO1Q9UM00 188 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 IQANK1A0A1B0GTG1 560 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 SPATA31D3P0C874 917 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 PYGBP11216 843 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 CDKN2BP42772 138 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 PTK7Q13308 1070 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 KYAT3Q6YP21 454 aaKnown RBP19.39■□□□□ 0.69
PSPC1-201ENST00000338910 SPATA31D4Q6ZUB0 917 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 PALM2Q8IXS6 379 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 NAT14Q8WUY8 206 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 MTBPQ96DY7 904 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 SNX27Q96L92 541 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 DDX56Q9NY93 547 aaKnown RBP19.39■□□□□ 0.69
PSPC1-201ENST00000338910 KLK14Q9P0G3 267 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 PPARGC1AQ9UBK2 798 aaKnown RBP19.39■□□□□ 0.69
PSPC1-201ENST00000338910 Q9Y3F1 56 aa19.39■□□□□ 0.69
PSPC1-201ENST00000338910 TRIP11Q15643 1979 aa19.38■□□□□ 0.69
PSPC1-201ENST00000338910 MYADML2A6NDP7 307 aa19.38■□□□□ 0.69
PSPC1-201ENST00000338910 SPECC1L-ADORA2AF8WAN1 911 aa19.38■□□□□ 0.69
PSPC1-201ENST00000338910 CA12O43570 354 aa19.38■□□□□ 0.69
PSPC1-201ENST00000338910 FKBP6O75344 327 aa19.38■□□□□ 0.69
PSPC1-201ENST00000338910 C6orf222P0C671 652 aaPredicted RBP19.38■□□□□ 0.69
PSPC1-201ENST00000338910 TM4SF4P48230 202 aa19.38■□□□□ 0.69
PSPC1-201ENST00000338910 CDC42EP1Q00587 391 aa19.38■□□□□ 0.69
PSPC1-201ENST00000338910 KDSRQ06136 332 aa19.38■□□□□ 0.69
PSPC1-201ENST00000338910 CFAP157Q5JU67 520 aa19.38■□□□□ 0.69
PSPC1-201ENST00000338910 FAM102AQ5T9C2 384 aaPredicted RBP19.38■□□□□ 0.69
PSPC1-201ENST00000338910 ACOT1Q86TX2 421 aa19.38■□□□□ 0.69
PSPC1-201ENST00000338910 PDSS2Q86YH6 399 aa19.38■□□□□ 0.69
PSPC1-201ENST00000338910 OR6Y1Q8NGX8 325 aa19.38■□□□□ 0.69
PSPC1-201ENST00000338910 SAE1Q9UBE0 346 aaPredicted RBP19.38■□□□□ 0.69
PSPC1-201ENST00000338910 PIN4Q9Y237 131 aaKnown RBP19.38■□□□□ 0.69
PSPC1-201ENST00000338910 DCAF8L1A6NGE4 600 aa19.37■□□□□ 0.69
PSPC1-201ENST00000338910 AKR1A1P14550 325 aa19.37■□□□□ 0.69
PSPC1-201ENST00000338910 GRIA2P42262 883 aa19.37■□□□□ 0.69
PSPC1-201ENST00000338910 GDF10P55107 478 aa19.37■□□□□ 0.69
PSPC1-201ENST00000338910 SH3BGRP55822 239 aaPredicted RBP19.37■□□□□ 0.69
PSPC1-201ENST00000338910 DYNLT1P63172 113 aa19.37■□□□□ 0.69
PSPC1-201ENST00000338910 PURAQ00577 322 aaKnown RBP19.37■□□□□ 0.69
PSPC1-201ENST00000338910 SLC25A11Q02978 314 aaKnown RBP19.37■□□□□ 0.69
PSPC1-201ENST00000338910 MDH1BQ5I0G3 518 aa19.37■□□□□ 0.69
PSPC1-201ENST00000338910 C7orf26Q96N11 449 aa19.37■□□□□ 0.69
PSPC1-201ENST00000338910 MIS12Q9H081 205 aa19.37■□□□□ 0.69
PSPC1-201ENST00000338910 GABRQQ9UN88 632 aa19.37■□□□□ 0.69
PSPC1-201ENST00000338910 RECQL4O94761 1208 aa19.37■□□□□ 0.69
PSPC1-201ENST00000338910 STAU1O95793 577 aaKnown RBP19.37■□□□□ 0.69
PSPC1-201ENST00000338910 TSHRP16473 764 aa19.37■□□□□ 0.69
PSPC1-201ENST00000338910 STIP1P31948 543 aaKnown RBP19.37■□□□□ 0.69
PSPC1-201ENST00000338910 GABRB2P47870 512 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms