RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 RGS16O15492 202 aaPredicted RBP16.81■□□□□ 0.28
HPS1-202ENST00000338546 EFCAB14O75071 495 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 OR4Q2P0C623 313 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 ATP5DP30049 168 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 GJA8P48165 433 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 GLUD2P49448 558 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 PSEN1P49768 467 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 GATMP50440 423 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 PPP2R5DQ14738 602 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 PKN2Q16513 984 aaKnown RBP16.81■□□□□ 0.28
HPS1-202ENST00000338546 TAC4Q86UU9 113 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 SCN4BQ8IWT1 228 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 PDIK1LQ8N165 341 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 RIBC1Q8N443 379 aaPredicted RBP16.81■□□□□ 0.28
HPS1-202ENST00000338546 EDEM1Q92611 657 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 PPP1R12CQ9BZL4 782 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 CENPHQ9H3R5 247 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 C10orf88Q9H8K7 445 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 TMEM39AQ9NV64 488 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 COX16Q9P0S2 106 aa16.81■□□□□ 0.28
HPS1-202ENST00000338546 IRAK2O43187 625 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 STK10O94804 968 aaKnown RBP16.8■□□□□ 0.28
HPS1-202ENST00000338546 ACSL3O95573 720 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 CLTBP09497 229 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 ALDH7A1P49419 539 aaKnown RBP16.8■□□□□ 0.28
HPS1-202ENST00000338546 CDR1P51861 262 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 TPI1P60174 286 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 KCNJ11Q14654 390 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 GLIPR1L2Q4G1C9 344 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 HEATR6Q6AI08 1181 aaKnown RBP16.8■□□□□ 0.28
HPS1-202ENST00000338546 MSANTD2Q6P1R3 559 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 SCD5Q86SK9 330 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 CEP57Q86XR8 500 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 MCUQ8NE86 351 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 ADAM32Q8TC27 787 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 HTR3CQ8WXA8 447 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 MAGEB5Q9BZ81 275 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 TKTL2Q9H0I9 626 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 CNOT10Q9H9A5 744 aaKnown RBP16.8■□□□□ 0.28
HPS1-202ENST00000338546 CLIC5Q9NZA1 410 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 FETUBQ9UGM5 382 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 XPO7Q9UIA9 1087 aaKnown RBP16.8■□□□□ 0.28
HPS1-202ENST00000338546 ZMYND8Q9ULU4 1186 aaPredicted RBP16.8■□□□□ 0.28
HPS1-202ENST00000338546 BACE2Q9Y5Z0 518 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 PLXNA3P51805 1871 aa16.8■□□□□ 0.28
HPS1-202ENST00000338546 SRRM3A6NNA2 597 aaPredicted RBP16.79■□□□□ 0.28
HPS1-202ENST00000338546 E7EVH7 732 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 CREB3O43889 395 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 SLC2A3P11169 496 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 MX2P20592 715 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 CCR1P32246 355 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 SERPINB6P35237 376 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 RPL10AP62906 217 aaKnown RBP16.79■□□□□ 0.28
HPS1-202ENST00000338546 BASP1P80723 227 aaKnown RBP16.79■□□□□ 0.28
HPS1-202ENST00000338546 NRG1Q02297 640 aaPredicted RBP16.79■□□□□ 0.28
HPS1-202ENST00000338546 ZNF33AQ06730 810 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 PRKD1Q15139 912 aaPredicted RBP16.79■□□□□ 0.28
HPS1-202ENST00000338546 RASA2Q15283 850 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 ACBD5Q5T8D3 534 aaPredicted RBP16.79■□□□□ 0.28
HPS1-202ENST00000338546 DEFB128Q7Z7B8 93 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 SH2D3CQ8N5H7 860 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 SERPINB11Q96P15 392 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 CAPS2Q9BXY5 557 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 ETNK2Q9NVF9 386 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 OR12D3Q9UGF7 316 aa16.79■□□□□ 0.28
HPS1-202ENST00000338546 NOVA2Q9UNW9 492 aaKnown RBP16.79■□□□□ 0.28
HPS1-202ENST00000338546 MTMR11A4FU01 709 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 MTSS1O43312 755 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 ERCC2P18074 760 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 TPSB2P20231 275 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 PHBP35232 272 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 FDFT1P37268 417 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 LMAN1P49257 510 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 PPP2R2AP63151 447 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 CDK16Q00536 496 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 PDIA2Q13087 525 aaKnown RBP16.78■□□□□ 0.28
HPS1-202ENST00000338546 MTA1Q13330 715 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 AUHQ13825 339 aaKnown RBP16.78■□□□□ 0.28
HPS1-202ENST00000338546 TPSAB1Q15661 275 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 USP41Q3LFD5 358 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 ANKRD22Q5VYY1 191 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 RNF168Q8IYW5 571 aaPredicted RBP16.78■□□□□ 0.28
HPS1-202ENST00000338546 RNF34Q969K3 372 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 C9orf72Q96LT7 481 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 PWWP2AQ96N64 755 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 RAB6BQ9NRW1 208 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 OLA1Q9NTK5 396 aaKnown RBP16.78■□□□□ 0.28
HPS1-202ENST00000338546 BCCIPQ9P287 314 aaKnown RBP eCLIP16.78■□□□□ 0.28
HPS1-202ENST00000338546 HSFX1Q9UBD0 423 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 LGALS13Q9UHV8 139 aa16.78■□□□□ 0.28
HPS1-202ENST00000338546 A0A0A0MRY4 1105 aa16.77■□□□□ 0.28
HPS1-202ENST00000338546 MFSD11O43934 449 aa16.77■□□□□ 0.28
HPS1-202ENST00000338546 OPHN1O60890 802 aa16.77■□□□□ 0.28
HPS1-202ENST00000338546 CDH16O75309 829 aa16.77■□□□□ 0.28
HPS1-202ENST00000338546 SPAG6O75602 509 aa16.77■□□□□ 0.28
HPS1-202ENST00000338546 HAPLN1P10915 354 aaPredicted RBP16.77■□□□□ 0.28
HPS1-202ENST00000338546 CPB1P15086 417 aa16.77■□□□□ 0.28
HPS1-202ENST00000338546 YWHAQP27348 245 aa16.77■□□□□ 0.28
HPS1-202ENST00000338546 MAGOHP61326 146 aaKnown RBP16.77■□□□□ 0.28
HPS1-202ENST00000338546 RTP2Q5QGT7 225 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms