RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 C1orf228Q6PIY5 440 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ITIH5Q86UX2 942 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 JAMLQ86YT9 394 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PLD5Q8N7P1 536 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ATL2Q8NHH9 583 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 CCDC114Q96M63 670 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 NKX2-4Q9H2Z4 354 aa15.28■□□□□ 0.04
CDK5RAP3-201ENST00000338399 FAM187AA6NFU0 413 aa15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 H3BNC9 293 aa15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 MOCS2O96007 188 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 GGCXP38435 758 aa15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 BYSLQ13895 437 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 PPP2R5DQ14738 602 aa15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 FBXO38Q6PIJ6 1188 aa15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 P3H4Q92791 437 aa15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SLC39A13Q96H72 371 aa15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 FCRL2Q96LA5 508 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SIK2Q9H0K1 926 aa15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 ZNF334Q9HCZ1 680 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 RCOR3Q9P2K3 495 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 UXTQ9UBK9 157 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 OR12D3Q9UGF7 316 aa15.27■□□□□ 0.04
CDK5RAP3-201ENST00000338399 SLC12A8A0AV02 714 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 KCNU1A8MYU2 1149 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 H0YGN5 161 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PAGE1O75459 146 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ECEL1O95672 775 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TUBBP07437 444 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 HMBSP08397 361 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ATP5C1P36542 298 aaKnown RBP15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SEMA3BQ13214 749 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TRADDQ15628 312 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TRIP4Q15650 581 aaPredicted RBP15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 HECTD3Q5T447 861 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DRICH1Q6PGQ1 229 aaPredicted RBP15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 IFT20Q8IY31 132 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SLC35B2Q8TB61 432 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GRK7Q8WTQ7 553 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 HAPLN3Q96S86 360 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GDF3Q9NR23 364 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ARHGEF4Q9NR80 690 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ETNK2Q9NVF9 386 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 XPO7Q9UIA9 1087 aaKnown RBP15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ZNF148Q9UQR1 794 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 UTP11Q9Y3A2 253 aaKnown RBP15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ASB3Q9Y575 518 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 HEY1Q9Y5J3 304 aa15.27■□□□□ 0.03
CDK5RAP3-201ENST00000338399 OBSL1O75147 1896 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DAPK3O43293 454 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RRP9O43818 475 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 H2AFXP16104 143 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TGM2P21980 687 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 MCM3P25205 808 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 VCPP55072 806 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TPI1P60174 286 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 NNTQ13423 1086 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PPP1R7Q15435 360 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RFX8Q6ZV50 586 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TMEM150AQ86TG1 271 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TADA2BQ86TJ2 420 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ZNF276Q8N554 614 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CASKIN2Q8WXE0 1202 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RUBCNQ92622 972 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SLCO2A1Q92959 643 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CDK5RAP1Q96SZ6 601 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 FRMD8P1Q9BZ68 369 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TRIM31Q9BZY9 425 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 NACA2Q9H009 215 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 OSBPL2Q9H1P3 480 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DPH5Q9H2P9 285 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TMEM51Q9NW97 253 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CHD7Q9P2D1 2997 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 FEZ2Q9UHY8 353 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 MSRAQ9UJ68 235 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DNMT3LQ9UJW3 386 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 MFHAS1Q9Y4C4 1052 aa15.26■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CCL16O15467 120 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 COCHO43405 550 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 MAP3K6O95382 1288 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 F11P03951 625 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SLC2A3P11169 496 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ZFXP17010 805 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PPP3CCP48454 512 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 EIF3EP60228 445 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DPYSQ14117 519 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 NOMO1Q15155 1222 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 OASLQ15646 514 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PPM1LQ5SGD2 360 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PPP2R2DQ66LE6 453 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 NCBP2-AS2Q69YL0 99 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CCNI2Q6ZMN8 369 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DDX42Q86XP3 938 aaKnown RBP eCLIP15.25■□□□□ 0.036e-10■□□□□ 8.4
CDK5RAP3-201ENST00000338399 SLC22A17Q8WUG5 538 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 IFT81Q8WYA0 676 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 NKD2Q969F2 451 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 EPAS1Q99814 870 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ERP44Q9BS26 406 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RAB17Q9H0T7 212 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 C10orf88Q9H8K7 445 aa15.25■□□□□ 0.03
CDK5RAP3-201ENST00000338399 IL21Q9HBE4 155 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms