RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TRDMT1O14717 391 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 USP17L7P0C7H9 530 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 C1orf146Q5VVC0 180 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 C12orf50Q8NA57 414 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 FAXDC2Q96IV6 333 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 SERPINB11Q96P15 392 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 SRPK1Q96SB4 655 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 THTPAQ9BU02 230 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 PHLPP1O60346 1717 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 KIF13BQ9NQT8 1826 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 CHADO15335 359 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 LGR5O75473 907 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 GP5P40197 560 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 ALDH1A3P47895 512 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 FLT3LGP49771 235 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 SLC25A52Q3SY17 297 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 RASIP1Q5U651 963 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 DTX3LQ8TDB6 740 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 GBP5Q96PP8 586 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 A0A0A0MRY4 1105 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 C2CD2LO14523 706 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 TSHRP16473 764 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 DNAL1Q4LDG9 190 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 RABGAP1LQ5R372 815 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 C1orf220Q5T0J3 134 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 RNF219Q5W0B1 726 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 CPT1BQ92523 772 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 NKD2Q969F2 451 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 P2RY11Q96G91 374 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 SPATA13Q96N96 652 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 TMEM109Q9BVC6 243 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 EML4Q9HC35 981 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 TMEM59LQ9UK28 342 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 ADAMTS5Q9UNA0 930 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 PIAS1O75925 651 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 GFAPP14136 432 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 DNAJB2P25686 324 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 HNRNPH1P31943 449 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 CUL3Q13618 768 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 TAF5Q15542 800 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 N4BP2L2Q92802 583 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 APOPT1Q96IL0 206 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 PPP1R36Q96LQ0 422 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 DDX50Q9BQ39 737 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 FAM124BQ9H5Z6 455 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 CACYBPQ9HB71 228 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 PCDH18Q9HCL0 1135 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 VANGL2Q9ULK5 521 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 PRRG1O14668 218 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 CD48P09326 243 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 RPA3P35244 121 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 RENBPP51606 427 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 GRAMD1BQ3KR37 738 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 FRA10AC1Q70Z53 315 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 TFAP2DQ7Z6R9 452 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 TSPAN17Q96FV3 270 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 LBHD1Q9BQE6 289 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 CICQ96RK0 1608 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 XPO1O14980 1071 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 STX7O15400 261 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 CPA3P15088 417 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 PTPN9P43378 593 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 ELAVL2Q12926 359 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 ZDHHC24Q6UX98 284 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 FICDQ9BVA6 458 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 DUSP16Q9BY84 665 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 NDFIP2Q9NV92 336 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 ZNF638Q14966 1978 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 NQO1P15559 274 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 GLRBP48167 497 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 MRNIPQ6NTE8 343 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 MTDHQ86UE4 582 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 UROC1Q96N76 676 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 EFHD1Q9BUP0 239 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 WDR27A2RRH5 827 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 C2CD4BA6NLJ0 364 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 H7C4K7 107 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 TARSP26639 723 aaKnown RBP6.46□□□□□ -1.37
PRKDC-202ENST00000338368 CPA2P48052 419 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 LAMB3Q13751 1172 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 TSPAN18Q96SJ8 248 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 NOD2Q9HC29 1040 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 ABCF3Q9NUQ8 709 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 GIT1Q9Y2X7 761 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 RNF103O00237 685 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 AP2B1P63010 937 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 GHRHRQ02643 423 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 DCAF12L1Q5VU92 463 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 TRABD2AQ86V40 505 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 DDIASQ8IXT1 998 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 SLC35B2Q8TB61 432 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 CDY1Q9Y6F8 540 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 DAB1O75553 588 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 CHRM3P20309 590 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 ANKRD20A4Q4UJ75 823 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 SLC39A12Q504Y0 691 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 PSTKQ8IV42 348 aaKnown RBP6.46□□□□□ -1.37
PRKDC-202ENST00000338368 NSL1Q96IY1 281 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 FAM167BQ9BTA0 163 aa6.46□□□□□ -1.37
PRKDC-202ENST00000338368 UPF3AQ9H1J1 476 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms