RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 EIF4HQ15056 248 aaKnown RBP11.14□□□□□ -0.63
CAPN3-202ENST00000337571 GEN1Q17RS7 908 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 BSPRYQ5W0U4 402 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 ISM2Q6H9L7 571 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 TMEM270Q6UE05 265 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 FMNL3Q8IVF7 1028 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 PPM1KQ8N3J5 372 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 KCTD13Q8WZ19 329 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 NDRG1Q92597 394 aaKnown RBP11.14□□□□□ -0.63
CAPN3-202ENST00000337571 EDEM1Q92611 657 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 PRCCQ92733 491 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-202ENST00000337571 TMA16Q96EY4 203 aaKnown RBP11.14□□□□□ -0.63
CAPN3-202ENST00000337571 ZNF419Q96HQ0 510 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-202ENST00000337571 HSPA12BQ96MM6 686 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 CEP63Q96MT8 703 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 NT5C1BQ96P26 610 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 CNGB3Q9NQW8 809 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 THAP10Q9P2Z0 257 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-202ENST00000337571 SUSD2Q9UGT4 822 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 PCDHB4Q9Y5E5 795 aa11.14□□□□□ -0.63
CAPN3-202ENST00000337571 SPTBN2O15020 2390 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 ADAMTS9Q9P2N4 1935 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 BICDL2A1A5D9 508 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 TRIM49BA6NDI0 452 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 TULP2O00295 520 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 ARHGAP33O14559 1287 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 TSPAN3O60637 253 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 OPHN1O60890 802 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 KRT37O76014 449 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 PAEPP09466 180 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 CD6P30203 668 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 FMO5P49326 533 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 PMS1P54277 932 aaKnown RBP11.13□□□□□ -0.63
CAPN3-202ENST00000337571 STILQ15468 1287 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 TRIP4Q15650 581 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-202ENST00000337571 PLEKHG6Q3KR16 790 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 FUT11Q495W5 492 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 ADGRF1Q5T601 910 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 PEAR1Q5VY43 1037 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-202ENST00000337571 LCLAT1Q6UWP7 414 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 SERPINA13PQ6UXR4 307 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 METTL3Q86U44 580 aaKnown RBP11.13□□□□□ -0.63
CAPN3-202ENST00000337571 TMPRSS6Q8IU80 811 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 ZC3H3Q8IXZ2 948 aaKnown RBP11.13□□□□□ -0.63
CAPN3-202ENST00000337571 DEFB124Q8NES8 71 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 ENGASEQ8NFI3 743 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 SPATA20Q8TB22 786 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 PTCD2Q8WV60 388 aaKnown RBP11.13□□□□□ -0.63
CAPN3-202ENST00000337571 ERCC4Q92889 916 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-202ENST00000337571 SLC35C1Q96A29 364 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 SIPA1Q96FS4 1042 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 PIWIL1Q96J94 861 aaKnown RBP11.13□□□□□ -0.63
CAPN3-202ENST00000337571 SLC6A17Q9H1V8 727 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 ITM2CQ9NQX7 267 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 SFMBT1Q9UHJ3 866 aa11.13□□□□□ -0.63
CAPN3-202ENST00000337571 YJEFN3A6XGL0 299 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 MEI4A8MW99 385 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 E7ENQ6 273 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 EPHX1P07099 455 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 IL12RB1P42701 662 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 SLC11A2P49281 568 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 ZNF234Q14588 700 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 CNGA2Q16280 664 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 KLHL10Q6JEL2 608 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 SLC41A1Q8IVJ1 513 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 CCDC117Q8IWD4 279 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-202ENST00000337571 UNC45BQ8IWX7 931 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 CADM4Q8NFZ8 388 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 IRGQQ8WZA9 623 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 TOE1Q96GM8 510 aaKnown RBP11.12□□□□□ -0.63
CAPN3-202ENST00000337571 NUP58Q9BVL2 599 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 GPR174Q9BXC1 333 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 PI4KAP42356 2102 aa11.12□□□□□ -0.63
CAPN3-202ENST00000337571 TYW5A2RUC4 315 aaKnown RBP11.11□□□□□ -0.63
CAPN3-202ENST00000337571 UPK3BL1B0FP48 263 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 UPK3BL2E5RIL1 263 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 M0QYV0 167 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 O00370 1275 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 PIK3R2O00459 728 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 PMM2O15305 246 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 P4HA2O15460 535 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 FGFR1OPO95684 399 aaKnown RBP11.11□□□□□ -0.63
CAPN3-202ENST00000337571 LATS1O95835 1130 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 GNA14O95837 355 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 ATP5BP06576 529 aaKnown RBP11.11□□□□□ -0.63
CAPN3-202ENST00000337571 NCAM1P13591 858 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 RGS7P49802 495 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 TPMTP51580 245 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 DAOAP59103 153 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 SEMA3BQ13214 749 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 ENPP2Q13822 863 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 HNRNPDQ14103 355 aaKnown RBP11.11□□□□□ -0.63
CAPN3-202ENST00000337571 FNDC3BQ53EP0 1204 aaKnown RBP11.11□□□□□ -0.63
CAPN3-202ENST00000337571 NUGGCQ68CJ6 796 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 RRAGAQ7L523 313 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 FAM217AQ8IXS0 508 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 ELOA2Q8IYF1 753 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-202ENST00000337571 SCML4Q8N228 414 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 MINDY1Q8N5J2 469 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 ZNF557Q8N988 423 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms