RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 PYGBP11216 843 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 GMPRP36959 345 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 IL9RQ01113 521 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 FITM2Q8N6M3 262 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 MYLPFQ96A32 169 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 RTP4Q96DX8 246 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 AGAP3Q96P47 875 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 PRDM12Q9H4Q4 367 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 PRKAR2AP13861 404 aaKnown RBP23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 SNX16P57768 344 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 SESN2P58004 480 aaPredicted RBP23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 MGAT3Q09327 533 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 PPP1R21Q6ZMI0 780 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 UNC5AQ6ZN44 842 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 STRADAQ7RTN6 431 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 VPS52Q8N1B4 723 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 HTR3CQ8WXA8 447 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 RNF186Q9NXI6 227 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 ACTL7BQ9Y614 415 aa23.88■■□□□ 1.41
CLPTM1-201ENST00000337392 AOC2O75106 756 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 DAB1O75553 588 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 CSH1P0DML2 217 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 CSH2P0DML3 217 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 ANKRD20A2Q5SQ80 823 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 ANKRD20A1Q5TYW2 823 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 ANKRD20A3Q5VUR7 823 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 OR10T2Q8NGX3 314 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 P2RY11Q96G91 374 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 CYTH2Q99418 400 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 NSRP1Q9H0G5 558 aaKnown RBP23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 DDIT4Q9NX09 232 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 GGA2Q9UJY4 613 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 ATXN2Q99700 1313 aaKnown RBP23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 SHROOM3Q8TF72 1996 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 NOS2P35228 1153 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 DAOAP59103 153 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 HHATQ5VTY9 493 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 MFSD14CQ5VZR4 134 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 CASC4Q6P4E1 433 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 NPWQ8N729 165 aa23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 QKIQ96PU8 341 aaKnown RBP eCLIP23.87■■□□□ 1.41
CLPTM1-201ENST00000337392 PSMB4P28070 264 aa23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 RDXP35241 583 aaKnown RBP23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 LPIN1Q14693 890 aa23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 KLHL38Q2WGJ6 581 aa23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 CDKL3Q8IVW4 592 aaPredicted RBP23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 TFB1MQ8WVM0 346 aaKnown RBP23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 WDR6Q9NNW5 1121 aaKnown RBP23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 PHTF1Q9UMS5 762 aa23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 WDR27A2RRH5 827 aa23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 RNF103O00237 685 aa23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 PRPF4O43172 522 aaKnown RBP eCLIP23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 INHBAP08476 426 aa23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 KIF2BQ8N4N8 673 aa23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 COLGALT1Q8NBJ5 622 aa23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 SGSM3Q96HU1 749 aa23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 OLFM3Q96PB7 478 aa23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 FAM111AQ96PZ2 611 aa23.86■■□□□ 1.41
CLPTM1-201ENST00000337392 SEPT4O43236 478 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 SDHAF4Q5VUM1 108 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 CD300LGQ6UXG3 332 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 ECHDC2Q86YB7 292 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 NT5C3BQ969T7 300 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 SIGLEC10Q96LC7 697 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 SLC13A1Q9BZW2 595 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 E2F8A0AVK6 867 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 TMEM88BA6NKF7 163 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 TRIM49D1C9J1S8 452 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 EEF2KO00418 725 aaKnown RBP23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 CPP00450 1065 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 BHLHA9Q7RTU4 235 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 RSPH3Q86UC2 560 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 SLC44A1Q8WWI5 657 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 MECRQ9BV79 373 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 SLC40A1Q9NP59 571 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 IKBKGQ9Y6K9 419 aa23.85■■□□□ 1.41
CLPTM1-201ENST00000337392 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 HHLA1C9JL84 531 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 CA12O43570 354 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 DGKIO75912 1065 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 FCGRTP55899 365 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 ITIH4Q14624 930 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 MTFR1Q15390 333 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 RFX8Q6ZV50 586 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 BANPQ8N9N5 519 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 CELF6Q96J87 481 aaKnown RBP23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 NOD1Q9Y239 953 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 MT-ND3P03897 115 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 ERCC2P18074 760 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 MROH9Q5TGP6 573 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 TTC17Q96AE7 1141 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 SPC25Q9HBM1 224 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 NUMBLQ9Y6R0 609 aa23.84■■□□□ 1.41
CLPTM1-201ENST00000337392 SLC2A13Q96QE2 648 aa23.83■■□□□ 1.41
CLPTM1-201ENST00000337392 APOL2Q9BQE5 337 aa23.83■■□□□ 1.41
CLPTM1-201ENST00000337392 SLC38A7Q9NVC3 462 aa23.83■■□□□ 1.41
CLPTM1-201ENST00000337392 UBP1Q9NZI7 540 aa23.83■■□□□ 1.41
CLPTM1-201ENST00000337392 CCDC78A2IDD5 438 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms