RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 LRRC4Q9HBW1 653 aa25.5■■□□□ 1.67
CDKN3-202ENST00000335183 TSPAN16Q9UKR8 245 aa25.5■■□□□ 1.67
CDKN3-202ENST00000335183 TSPAN3O60637 253 aa25.49■■□□□ 1.67
CDKN3-202ENST00000335183 OXTRP30559 389 aa25.49■■□□□ 1.67
CDKN3-202ENST00000335183 COPAP53621 1224 aa25.49■■□□□ 1.67
CDKN3-202ENST00000335183 PDE4CQ08493 712 aa25.49■■□□□ 1.67
CDKN3-202ENST00000335183 TMEM215Q68D42 235 aa25.49■■□□□ 1.67
CDKN3-202ENST00000335183 FAM217AQ8IXS0 508 aa25.49■■□□□ 1.67
CDKN3-202ENST00000335183 CADM4Q8NFZ8 388 aa25.49■■□□□ 1.67
CDKN3-202ENST00000335183 ZDHHC5Q9C0B5 715 aa25.49■■□□□ 1.67
CDKN3-202ENST00000335183 OLA1Q9NTK5 396 aaKnown RBP25.49■■□□□ 1.67
CDKN3-202ENST00000335183 SFMBT1Q9UHJ3 866 aa25.49■■□□□ 1.67
CDKN3-202ENST00000335183 NUMA1Q14980 2115 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 A0A1W2PQ27 194 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 A0A1W2PQ64 194 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 XPO1O14980 1071 aaKnown RBP25.48■■□□□ 1.67
CDKN3-202ENST00000335183 HLA-EP13747 358 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 CD19P15391 556 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 HARS2P49590 506 aaKnown RBP25.48■■□□□ 1.67
CDKN3-202ENST00000335183 BCAT1P54687 386 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 MCCD1P59942 119 aaPredicted RBP25.48■■□□□ 1.67
CDKN3-202ENST00000335183 ADIGQ0VDE8 80 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 TRIP4Q15650 581 aaPredicted RBP25.48■■□□□ 1.67
CDKN3-202ENST00000335183 CBWD6Q4V339 395 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 MPPE1Q53F39 396 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 CBWD3Q5JTY5 395 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 CBWD5Q5RIA9 395 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 PM20D1Q6GTS8 502 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 RAB44Q7Z6P3 723 aaPredicted RBP25.48■■□□□ 1.67
CDKN3-202ENST00000335183 FAM124AQ86V42 546 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 RBBP8NLQ8NC74 664 aaPredicted RBP25.48■■□□□ 1.67
CDKN3-202ENST00000335183 RNF139Q8WU17 664 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 EDEM1Q92611 657 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 IPO9Q96P70 1041 aaKnown RBP25.48■■□□□ 1.67
CDKN3-202ENST00000335183 HESX1Q9UBX0 185 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 NFE2L3Q9Y4A8 694 aa25.48■■□□□ 1.67
CDKN3-202ENST00000335183 MUC22E2RYF6 1773 aaPredicted RBP25.47■■□□□ 1.67
CDKN3-202ENST00000335183 METTL12A8MUP2 240 aa25.47■■□□□ 1.67
CDKN3-202ENST00000335183 BST2Q10589 180 aaKnown RBP25.47■■□□□ 1.67
CDKN3-202ENST00000335183 SGO2Q562F6 1265 aa25.47■■□□□ 1.67
CDKN3-202ENST00000335183 BHLHA9Q7RTU4 235 aa25.47■■□□□ 1.67
CDKN3-202ENST00000335183 NUP58Q9BVL2 599 aa25.47■■□□□ 1.67
CDKN3-202ENST00000335183 SCAND2PQ9GZW5 306 aaPredicted RBP25.47■■□□□ 1.67
CDKN3-202ENST00000335183 EIF2B4Q9UI10 523 aaKnown RBP25.47■■□□□ 1.67
CDKN3-202ENST00000335183 TMEM131Q92545 1883 aa25.47■■□□□ 1.67
CDKN3-202ENST00000335183 ASPMQ8IZT6 3477 aa25.46■■□□□ 1.67
CDKN3-202ENST00000335183 BCAT2O15382 392 aaPredicted RBP25.46■■□□□ 1.67
CDKN3-202ENST00000335183 TIMM44O43615 452 aa25.46■■□□□ 1.67
CDKN3-202ENST00000335183 FTH1P19P0C7X4 201 aa25.46■■□□□ 1.67
CDKN3-202ENST00000335183 HOXD9P28356 352 aaPredicted RBP25.46■■□□□ 1.67
CDKN3-202ENST00000335183 CUL2Q13617 745 aa25.46■■□□□ 1.67
CDKN3-202ENST00000335183 FNDC3BQ53EP0 1204 aaKnown RBP25.46■■□□□ 1.67
CDKN3-202ENST00000335183 PNPLA1Q8N8W4 532 aa25.46■■□□□ 1.67
CDKN3-202ENST00000335183 UBA3Q8TBC4 463 aa25.46■■□□□ 1.67
CDKN3-202ENST00000335183 SNX19Q92543 992 aa25.46■■□□□ 1.67
CDKN3-202ENST00000335183 CCDC34Q96HJ3 373 aa25.46■■□□□ 1.67
CDKN3-202ENST00000335183 IL21RQ9HBE5 538 aa25.46■■□□□ 1.67
CDKN3-202ENST00000335183 HBS1LQ9Y450 684 aaKnown RBP25.46■■□□□ 1.67
CDKN3-202ENST00000335183 FAM221BA6H8Z2 402 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 IGLV3-19P01714 112 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 HLA-FP30511 346 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 PNOCQ13519 176 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 BSPRYQ5W0U4 402 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 CHST9Q7L1S5 443 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 SIX6OS1Q8N1H7 587 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 ZNF366Q8N895 744 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 OR2T3Q8NH03 318 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 SETD7Q8WTS6 366 aaKnown RBP25.45■■□□□ 1.66
CDKN3-202ENST00000335183 CYB5D2Q8WUJ1 264 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 TSG101Q99816 390 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 GAREM1Q9H706 876 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 GDPD2Q9HCC8 539 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 ATP6V1DQ9Y5K8 247 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 PLXNB3Q9ULL4 1909 aa25.45■■□□□ 1.66
CDKN3-202ENST00000335183 PTPRBP23467 1997 aa25.44■■□□□ 1.66
CDKN3-202ENST00000335183 YJEFN3A6XGL0 299 aa25.44■■□□□ 1.66
CDKN3-202ENST00000335183 E7ENQ6 273 aa25.44■■□□□ 1.66
CDKN3-202ENST00000335183 MSI1O43347 362 aaKnown RBP25.44■■□□□ 1.66
CDKN3-202ENST00000335183 CER1O95813 267 aa25.44■■□□□ 1.66
CDKN3-202ENST00000335183 PRCPP42785 496 aa25.44■■□□□ 1.66
CDKN3-202ENST00000335183 YWHAEP62258 255 aaKnown RBP25.44■■□□□ 1.66
CDKN3-202ENST00000335183 LRMPQ12912 555 aa25.44■■□□□ 1.66
CDKN3-202ENST00000335183 WFIKKN2Q8TEU8 576 aa25.44■■□□□ 1.66
CDKN3-202ENST00000335183 ADAMTS14Q8WXS8 1223 aa25.44■■□□□ 1.66
CDKN3-202ENST00000335183 TMA16Q96EY4 203 aaKnown RBP25.44■■□□□ 1.66
CDKN3-202ENST00000335183 LHX5Q9H2C1 402 aa25.44■■□□□ 1.66
CDKN3-202ENST00000335183 PLA2G4CQ9UP65 541 aa25.44■■□□□ 1.66
CDKN3-202ENST00000335183 LCP1P13796 627 aa25.43■■□□□ 1.66
CDKN3-202ENST00000335183 MATKP42679 507 aa25.43■■□□□ 1.66
CDKN3-202ENST00000335183 ZNF445P59923 1031 aa25.43■■□□□ 1.66
CDKN3-202ENST00000335183 ABCC13Q9NSE7 274 aa25.43■■□□□ 1.66
CDKN3-202ENST00000335183 ABCB8Q9NUT2 735 aa25.43■■□□□ 1.66
CDKN3-202ENST00000335183 RMND1Q9NWS8 449 aa25.43■■□□□ 1.66
CDKN3-202ENST00000335183 COQ4Q9Y3A0 265 aa25.43■■□□□ 1.66
CDKN3-202ENST00000335183 CACNA1GO43497 2377 aa25.42■■□□□ 1.66
CDKN3-202ENST00000335183 TP53BP1Q12888 1972 aaPredicted RBP25.42■■□□□ 1.66
CDKN3-202ENST00000335183 SLC16A3O15427 465 aaKnown RBP25.42■■□□□ 1.66
CDKN3-202ENST00000335183 VDRP11473 427 aa25.42■■□□□ 1.66
CDKN3-202ENST00000335183 BNC1Q01954 994 aa25.42■■□□□ 1.66
CDKN3-202ENST00000335183 CAMK2GQ13555 558 aaPredicted RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms