RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TRAV19A0A0A6YYK7 116 aa22.32■■□□□ 1.16
TPM1-204ENST00000334895 C3orf70A6NLC5 250 aaPredicted RBP22.32■■□□□ 1.16
TPM1-204ENST00000334895 PI4K2BG5E9Z4 385 aa22.32■■□□□ 1.16
TPM1-204ENST00000334895 PYGMP11217 842 aa22.32■■□□□ 1.16
TPM1-204ENST00000334895 PFKLP17858 780 aa22.32■■□□□ 1.16
TPM1-204ENST00000334895 DDX6P26196 483 aaKnown RBP eCLIP22.32■■□□□ 1.16
TPM1-204ENST00000334895 SLC7A9P82251 487 aa22.32■■□□□ 1.16
TPM1-204ENST00000334895 RING1Q06587 406 aa22.32■■□□□ 1.16
TPM1-204ENST00000334895 ZNF211Q13398 564 aaPredicted RBP22.32■■□□□ 1.16
TPM1-204ENST00000334895 EP400NLQ6ZTU2 488 aa22.32■■□□□ 1.16
TPM1-204ENST00000334895 PYROXD2Q8N2H3 581 aa22.32■■□□□ 1.16
TPM1-204ENST00000334895 RNF34Q969K3 372 aa22.32■■□□□ 1.16
TPM1-204ENST00000334895 ZSWIM3Q96MP5 696 aa22.32■■□□□ 1.16
TPM1-204ENST00000334895 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.32■■□□□ 1.16
TPM1-204ENST00000334895 CPQQ9Y646 472 aa22.32■■□□□ 1.16
TPM1-204ENST00000334895 ZNF185O15231 689 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 KRT1P04264 644 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 CKMP06732 381 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 CD48P09326 243 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 PRLRP16471 622 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 ARHGAP15Q53QZ3 475 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 SMG9Q9H0W8 520 aaKnown RBP22.31■■□□□ 1.16
TPM1-204ENST00000334895 CARD9Q9H257 536 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 DDX56Q9NY93 547 aaKnown RBP22.31■■□□□ 1.16
TPM1-204ENST00000334895 SAR1BQ9Y6B6 198 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 SOBPA7XYQ1 873 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 STC2O76061 302 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 KPNA1P52294 538 aaPredicted RBP22.31■■□□□ 1.16
TPM1-204ENST00000334895 AIF1P55008 147 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 COG7P83436 770 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 ITIH3Q06033 890 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 CBX2Q14781 532 aaPredicted RBP22.31■■□□□ 1.16
TPM1-204ENST00000334895 DPYSL2Q16555 572 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 CMTM8Q8IZV2 173 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 EXD1Q8NHP7 514 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 FAM71BQ8TC56 605 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 RNF25Q96BH1 459 aaPredicted RBP22.31■■□□□ 1.16
TPM1-204ENST00000334895 KCTD15Q96SI1 283 aaPredicted RBP22.31■■□□□ 1.16
TPM1-204ENST00000334895 TMEM51Q9NW97 253 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 SNX10Q9Y5X0 201 aa22.31■■□□□ 1.16
TPM1-204ENST00000334895 CLUHO75153 1309 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 LRRD1A4D1F6 860 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 GREM1O60565 184 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 PAGE1O75459 146 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 MOCS2O96007 188 aaPredicted RBP22.3■■□□□ 1.16
TPM1-204ENST00000334895 KLKB1P03952 638 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 SLC2A3P11169 496 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 TCP1P17987 556 aaKnown RBP22.3■■□□□ 1.16
TPM1-204ENST00000334895 FSHRP23945 695 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 KDELR1P24390 212 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 L1CAMP32004 1257 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 ARTNQ5T4W7 220 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 MFSD7Q6UXD7 560 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 PSTKQ8IV42 348 aaKnown RBP22.3■■□□□ 1.16
TPM1-204ENST00000334895 PLD4Q96BZ4 506 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 DHX35Q9H5Z1 703 aaKnown RBP22.3■■□□□ 1.16
TPM1-204ENST00000334895 PCDH18Q9HCL0 1135 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 DENND4AQ7Z401 1863 aa22.3■■□□□ 1.16
TPM1-204ENST00000334895 FAM72CH0Y354 149 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 ZRANB2O95218 330 aaKnown RBP eCLIP22.29■■□□□ 1.16
TPM1-204ENST00000334895 APOEP02649 317 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 GGCXP38435 758 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 CDH6P55285 790 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 SEMA3BQ13214 749 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 ARL13BQ3SXY8 428 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 EFHC2Q5JST6 749 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 DNTTIP2Q5QJE6 756 aaKnown RBP22.29■■□□□ 1.16
TPM1-204ENST00000334895 ZFYVE27Q5T4F4 411 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 FAM72AQ5TYM5 149 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 FAM72DQ6L9T8 149 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 FAM72BQ86X60 149 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 NPAS3Q8IXF0 933 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 HERPUD2Q9BSE4 406 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 SLITRK6Q9H5Y7 841 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 ARHGAP26Q9UNA1 814 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 CCL26Q9Y258 94 aa22.29■■□□□ 1.16
TPM1-204ENST00000334895 NUP210Q8TEM1 1887 aaPredicted RBP22.29■■□□□ 1.16
TPM1-204ENST00000334895 URI1O94763 535 aaPredicted RBP22.28■■□□□ 1.16
TPM1-204ENST00000334895 PRAMEF12O95522 483 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 IRF1P10914 325 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 IL4RP24394 825 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 DPYSL3Q14195 570 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 LLGL1Q15334 1064 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 CLUL1Q15846 466 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 TAZQ16635 292 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 PIK3R6Q5UE93 754 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 NUGGCQ68CJ6 796 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 RCOR2Q8IZ40 523 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 KCTD6Q8NC69 237 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 RIN3Q8TB24 985 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 TSC1Q92574 1164 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 USP13Q92995 863 aaPredicted RBP22.28■■□□□ 1.16
TPM1-204ENST00000334895 MS4A14Q96JA4 679 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 PBKQ96KB5 322 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 HAPLN3Q96S86 360 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 HS3ST4Q9Y661 456 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 UNC80Q8N2C7 3258 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 CES2O00748 559 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 CDKN2BP42772 138 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 MMRN1Q13201 1228 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms