RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 WBP11Q9Y2W2 641 aaKnown RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 TMEM2Q9UHN6 1383 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 HEG1Q9ULI3 1381 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 SLC26A4O43511 780 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ENTPD5O75356 428 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 TFRCP02786 760 aaKnown RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ATP5BP06576 529 aaKnown RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 NFICP08651 508 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ERCC2P18074 760 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 CCNHP51946 323 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 SLC25A3Q00325 362 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 VEPH1Q14D04 833 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 CCNG2Q16589 344 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 BOLA3Q53S33 107 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 CIAPIN1Q6FI81 312 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 DNAAF5Q86Y56 855 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 HIPK1Q86Z02 1210 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 MYO1HQ8N1T3 1032 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 IGDCC4Q8TDY8 1250 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 YME1L1Q96TA2 773 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 NIF3L1Q9GZT8 377 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 COA1Q9GZY4 146 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 TMEM138Q9NPI0 162 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 LGR5O75473 907 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 GSTM5P46439 218 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 CCNG1P51959 295 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ERVK-9P63128 1117 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ADAM17P78536 824 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 MPP3Q13368 585 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 PLA2G4FQ68DD2 849 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 TTC7BQ86TV6 843 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 TRIM74Q86UV6 250 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 TRIM73Q86UV7 250 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 CAMK1DQ8IU85 385 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 PCDH20Q8N6Y1 951 aaKnown RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 APOL2Q9BQE5 337 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 TOR4AQ9NXH8 423 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 HOXC10Q9NYD6 342 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 GSTK1Q9Y2Q3 226 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 AAR2Q9Y312 384 aaKnown RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 UBE2QL1A1L167 161 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 C2orf81A6NN90 581 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 PAICSP22234 425 aaKnown RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 RPA3P35244 121 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ARPC4P59998 168 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 FAM43BQ6ZT52 329 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 EMC1Q8N766 993 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 AMER2Q8N7J2 671 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 RNASE11Q8TAA1 199 aaKnown RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 FAR1Q8WVX9 515 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 EZH1Q92800 747 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ING3Q9NXR8 418 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 MAP3K20Q9NYL2 800 aaKnown RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ANAPC2Q9UJX6 822 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 A0A0A6YYK5 440 aaPredicted RBP10.03□□□□□ -0.8
COL4A6-201ENST00000334504 UNC5CO95185 931 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 IGKV5-2P06315 115 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 PSMD4P55036 377 aaKnown RBP10.03□□□□□ -0.8
COL4A6-201ENST00000334504 PKN1Q16512 942 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 THOC7Q6I9Y2 204 aaKnown RBP10.03□□□□□ -0.8
COL4A6-201ENST00000334504 MOSPD2Q8NHP6 518 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 FICDQ9BVA6 458 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 DCLK3Q9C098 648 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 PHACTR1Q9C0D0 580 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 WDR41Q9HAD4 459 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 FBXO28Q9NVF7 368 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 CMTM6Q9NX76 183 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 KCND2Q9NZV8 630 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 ERI2A8K979 691 aaKnown RBP10.03□□□□□ -0.8
COL4A6-201ENST00000334504 PLOD3O60568 738 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 VAV1P15498 845 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 TATDN2Q93075 761 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 ZHX1-C8orf76Q96EF9 292 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 OTUD5Q96G74 571 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 TBC1D10AQ9BXI6 508 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.03□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF224Q9NZL3 707 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 TRPC4Q9UBN4 977 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 PMF1-BGLAPU3KQ54 211 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 PALLDQ8WX93 1383 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 CD3EAPO15446 510 aaKnown RBP10.03□□□□□ -0.8
COL4A6-201ENST00000334504 KATNA1O75449 491 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 DGAT1O75907 488 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 CTDNEP1O95476 244 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 FDPSP14324 419 aaKnown RBP10.03□□□□□ -0.8
COL4A6-201ENST00000334504 FGFR2P21802 821 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 NOS3P29474 1203 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 LRPAP1P30533 357 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 PTSQ03393 145 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 TRAP1Q12931 704 aaKnown RBP10.03□□□□□ -0.8
COL4A6-201ENST00000334504 CUL2Q13617 745 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 EGFLAMQ63HQ2 1017 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 RNF43Q68DV7 783 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 FNDC5Q8NAU1 212 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 SPIRE2Q8WWL2 714 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 ELOVL6Q9H5J4 265 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 PCDH12Q9NPG4 1184 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 STARD13Q9Y3M8 1113 aa10.03□□□□□ -0.8
COL4A6-201ENST00000334504 PLA2G6O60733 806 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms