RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 SLC7A6OSQ96CW6 309 aaPredicted RBP19.54■□□□□ 0.72
RFTN1-201ENST00000334133 TMEM120AQ9BXJ8 343 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 TRIM55Q9BYV6 548 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 ANLNQ9NQW6 1124 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 FZD10Q9ULW2 581 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 SNX10Q9Y5X0 201 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 DCAF8L1A6NGE4 600 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 RNF103O00237 685 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 MLH1P40692 756 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 CACNA2D1P54289 1103 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 ZBTB16Q05516 673 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 GPR162Q16538 588 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 C16orf46Q6P387 395 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 CLNKQ7Z7G1 428 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 KCNV2Q8TDN2 545 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 FBXO41Q8TF61 875 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 P2RY11Q96G91 374 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 TBC1D10AQ9BXI6 508 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 KRT82Q9NSB4 513 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 TMEM30AQ9NV96 361 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 ARMCX1Q9P291 453 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 USP3Q9Y6I4 520 aa19.54■□□□□ 0.72
RFTN1-201ENST00000334133 PTPN1P18031 435 aaKnown RBP19.53■□□□□ 0.72
RFTN1-201ENST00000334133 MGAT1P26572 445 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 PSMB4P28070 264 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 TKTL1P51854 596 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 NBPF20Q3BBV1 942 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 SV2CQ496J9 727 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 PREPLQ4J6C6 727 aaPredicted RBP19.53■□□□□ 0.72
RFTN1-201ENST00000334133 GPRIN1Q7Z2K8 1008 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 LONP2Q86WA8 852 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 SIX6OS1Q8N1H7 587 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 SLC7A14Q8TBB6 771 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 RNF139Q8WU17 664 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 USP6NLQ92738 828 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 PAAF1Q9BRP4 392 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 GDAP2Q9NXN4 497 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 SPAG6O75602 509 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 DHRS4L1P0CG22 281 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 ZNF865P0CJ78 1059 aaPredicted RBP19.53■□□□□ 0.72
RFTN1-201ENST00000334133 TSHRP16473 764 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 PRKCHP24723 683 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 ARFIP2P53365 341 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 SLC25A52Q3SY17 297 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 CLEC20AQ6ZU45 233 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 GSDMBQ8TAX9 411 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 TNIP3Q96KP6 325 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 GAD1Q99259 594 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 DUSP16Q9BY84 665 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 PRDM12Q9H4Q4 367 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 KCNK13Q9HB14 408 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 HTTP42858 3142 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 NUP205Q92621 2012 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 IQCA1LA6NCM1 817 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 MYADML2A6NDP7 307 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 C2CD2LO14523 706 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 EZRP15311 586 aaKnown RBP19.53■□□□□ 0.72
RFTN1-201ENST00000334133 ADAM17P78536 824 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 TMPRSS15P98073 1019 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 PRKD1Q15139 912 aaPredicted RBP19.53■□□□□ 0.72
RFTN1-201ENST00000334133 EFHC1Q5JVL4 640 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 PLCD3Q8N3E9 789 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 EDEM1Q92611 657 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 ATXN7L3BQ96GX2 97 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 ARL8BQ9NVJ2 186 aa19.53■□□□□ 0.72
RFTN1-201ENST00000334133 DDX43Q9NXZ2 648 aaKnown RBP19.53■□□□□ 0.72
RFTN1-201ENST00000334133 I6L893 689 aaPredicted RBP19.52■□□□□ 0.72
RFTN1-201ENST00000334133 CAPN9O14815 690 aa19.52■□□□□ 0.72
RFTN1-201ENST00000334133 XPO1O14980 1071 aaKnown RBP19.52■□□□□ 0.72
RFTN1-201ENST00000334133 MYL2P10916 166 aa19.52■□□□□ 0.72
RFTN1-201ENST00000334133 NPR3P17342 541 aa19.52■□□□□ 0.72
RFTN1-201ENST00000334133 SLC8A1P32418 973 aa19.52■□□□□ 0.72
RFTN1-201ENST00000334133 OXNAD1Q96HP4 312 aaPredicted RBP19.52■□□□□ 0.72
RFTN1-201ENST00000334133 HSFY1Q96LI6 401 aa19.52■□□□□ 0.72
RFTN1-201ENST00000334133 ULBP1Q9BZM6 244 aa19.52■□□□□ 0.72
RFTN1-201ENST00000334133 PNPLA8Q9NP80 782 aa19.52■□□□□ 0.72
RFTN1-201ENST00000334133 PSAT1Q9Y617 370 aa19.52■□□□□ 0.72
RFTN1-201ENST00000334133 MYBPHLA2RUH7 354 aa19.52■□□□□ 0.71
RFTN1-201ENST00000334133 YJEFN3A6XGL0 299 aa19.52■□□□□ 0.71
RFTN1-201ENST00000334133 E7ENQ6 273 aa19.52■□□□□ 0.71
RFTN1-201ENST00000334133 ANP32DO95626 131 aa19.52■□□□□ 0.71
RFTN1-201ENST00000334133 DEUP1Q05D60 604 aa19.52■□□□□ 0.71
RFTN1-201ENST00000334133 CHI3L2Q15782 390 aa19.52■□□□□ 0.71
RFTN1-201ENST00000334133 ALYREFQ86V81 257 aaKnown RBP19.52■□□□□ 0.71
RFTN1-201ENST00000334133 KIRREL3Q8IZU9 778 aa19.52■□□□□ 0.71
RFTN1-201ENST00000334133 USP17L7P0C7H9 530 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 KCNE1P15382 129 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 ACADSBP45954 432 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 BST1Q10588 318 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 MAP2K5Q13163 448 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 PGBD4Q96DM1 585 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 C20orf27Q9GZN8 174 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 FAM124BQ9H5Z6 455 aaPredicted RBP19.51■□□□□ 0.71
RFTN1-201ENST00000334133 CRTAC1Q9NQ79 661 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 SLC45A1Q9Y2W3 748 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 PLLPQ9Y342 182 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 A0A0A0MRY4 1105 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 C17orf102A2RUQ5 167 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 CASTOR2A6NHX0 329 aa19.51■□□□□ 0.71
RFTN1-201ENST00000334133 H0Y3Z8 333 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms