RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 VPS28Q9UK41 221 aa25.04■■□□□ 1.6
SOX1-201ENST00000330949 BMP10O95393 424 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 C8BP07358 591 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 ACO1P21399 889 aaKnown RBP25.03■■□□□ 1.6
SOX1-201ENST00000330949 RPL10AP62906 217 aaKnown RBP25.03■■□□□ 1.6
SOX1-201ENST00000330949 KRT80Q6KB66 452 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 BNC2Q6ZN30 1099 aaPredicted RBP25.03■■□□□ 1.6
SOX1-201ENST00000330949 THNSL1Q8IYQ7 743 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 NEURL2Q9BR09 285 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 TUT1Q9H6E5 874 aaKnown RBP25.03■■□□□ 1.6
SOX1-201ENST00000330949 PNPOQ9NVS9 261 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 KIAA1522Q9P206 1035 aaPredicted RBP25.03■■□□□ 1.6
SOX1-201ENST00000330949 CDH7Q9ULB5 785 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 GSRP00390 522 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 HSPA1LP34931 641 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 NUDT2P50583 147 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 NDST2P52849 883 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 C21orf59P57076 290 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 YWHAZP63104 245 aaKnown RBP25.03■■□□□ 1.6
SOX1-201ENST00000330949 TATDN1Q6P1N9 297 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 MAP4K3Q8IVH8 894 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 EME1Q96AY2 570 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 ZNF512Q96ME7 567 aaPredicted RBP25.03■■□□□ 1.6
SOX1-201ENST00000330949 PACSIN3Q9UKS6 424 aa25.03■■□□□ 1.6
SOX1-201ENST00000330949 PCNTO95613 3336 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 CCDC162PA2VCL2 907 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 SOBPA7XYQ1 873 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 APOEP02649 317 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 KRT7P08729 469 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 RXRGP48443 463 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 THOP1P52888 689 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 CLVS1Q8IUQ0 354 aaPredicted RBP25.02■■□□□ 1.6
SOX1-201ENST00000330949 FAF2Q96CS3 445 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 THAP11Q96EK4 314 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 PLEKHA8Q96JA3 519 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 GPATCH1Q9BRR8 931 aaKnown RBP25.02■■□□□ 1.6
SOX1-201ENST00000330949 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.02■■□□□ 1.6
SOX1-201ENST00000330949 POPDC2Q9HBU9 364 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 SUN2Q9UH99 717 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 UGT1A9O60656 530 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 ZNF26P17031 533 aaPredicted RBP25.02■■□□□ 1.6
SOX1-201ENST00000330949 C15orf39Q6ZRI6 1047 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 FASTKD5Q7L8L6 764 aaKnown RBP25.02■■□□□ 1.6
SOX1-201ENST00000330949 KYQ8NBH2 561 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 BHLHE22Q8NFJ8 381 aaPredicted RBP25.02■■□□□ 1.6
SOX1-201ENST00000330949 CASP10Q92851 521 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 WRNIP1Q96S55 665 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 HIPK3Q9H422 1215 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 UGT1A7Q9HAW7 530 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 UGT1A10Q9HAW8 530 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 UGT1A8Q9HAW9 530 aa25.02■■□□□ 1.6
SOX1-201ENST00000330949 APOC4-APOC2K7ER74 178 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 APOC2P02655 101 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 CSH1P0DML2 217 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 CSH2P0DML3 217 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 CHRNA5P30532 468 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 DPYSQ14117 519 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 DACT2Q5SW24 774 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 NIPAL1Q6NVV3 410 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 C16orf46Q6P387 395 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 MIER3Q7Z3K6 550 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 CARM1Q86X55 608 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 SMYD2Q9NRG4 433 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 ZNF195O14628 629 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 AIM2O14862 343 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 GSTT2P0CG29 244 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 GSTT2BP0CG30 244 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 XRCC1P18887 633 aaPredicted RBP25.01■■□□□ 1.59
SOX1-201ENST00000330949 VWA5B1Q5TIE3 1220 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 TIFABQ6ZNK6 161 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 CENPSQ8N2Z9 138 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 TMEM102Q8N9M5 508 aaPredicted RBP25.01■■□□□ 1.59
SOX1-201ENST00000330949 PDCD6IPQ8WUM4 868 aaKnown RBP25.01■■□□□ 1.59
SOX1-201ENST00000330949 FAM84AQ96KN4 292 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 SNX27Q96L92 541 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 ZNF597Q96LX8 424 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 SORT1Q99523 831 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 DCUN1D5Q9BTE7 237 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 EHMT1Q9H9B1 1298 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 SLC9A2Q9UBY0 812 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 EBF1Q9UH73 591 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 ANKRD31Q8N7Z5 1873 aa25.01■■□□□ 1.59
SOX1-201ENST00000330949 XPOTO43592 962 aaKnown RBP25■■□□□ 1.59
SOX1-201ENST00000330949 CDH3P22223 829 aa25■■□□□ 1.59
SOX1-201ENST00000330949 KCNA4P22459 653 aa25■■□□□ 1.59
SOX1-201ENST00000330949 CUL2Q13617 745 aa25■■□□□ 1.59
SOX1-201ENST00000330949 PPP2R5DQ14738 602 aa25■■□□□ 1.59
SOX1-201ENST00000330949 PIGGQ5H8A4 983 aa25■■□□□ 1.59
SOX1-201ENST00000330949 METTL21CQ5VZV1 264 aa25■■□□□ 1.59
SOX1-201ENST00000330949 PODNQ7Z5L7 613 aa25■■□□□ 1.59
SOX1-201ENST00000330949 C12orf43Q96C57 262 aaKnown RBP25■■□□□ 1.59
SOX1-201ENST00000330949 CDRT15Q96T59 188 aa25■■□□□ 1.59
SOX1-201ENST00000330949 RIT2Q99578 217 aa25■■□□□ 1.59
SOX1-201ENST00000330949 TSC22D4Q9Y3Q8 395 aa25■■□□□ 1.59
SOX1-201ENST00000330949 TCRBV5S1A1TA0A578 114 aa25■■□□□ 1.59
SOX1-201ENST00000330949 HMX2A2RU54 273 aa25■■□□□ 1.59
SOX1-201ENST00000330949 ZBTB14O43829 449 aa25■■□□□ 1.59
SOX1-201ENST00000330949 ONECUT3O60422 494 aaPredicted RBP25■■□□□ 1.59
SOX1-201ENST00000330949 CLASP2O75122 1294 aaKnown RBP25■■□□□ 1.59
SOX1-201ENST00000330949 TOP3BO95985 862 aaKnown RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms