RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 BZW1Q7L1Q6 419 aaKnown RBP15.04■□□□□ -0
TPM3-206ENST00000330188 NETO2Q8NC67 525 aa15.04■□□□□ -0
TPM3-206ENST00000330188 RNF139Q8WU17 664 aa15.04■□□□□ -0
TPM3-206ENST00000330188 ZFP42Q96MM3 310 aa15.04■□□□□ -0
TPM3-206ENST00000330188 SLC2A13Q96QE2 648 aa15.04■□□□□ -0
TPM3-206ENST00000330188 AP5M1Q9H0R1 490 aa15.04■□□□□ -0
TPM3-206ENST00000330188 PRDM16Q9HAZ2 1276 aa15.04■□□□□ -0
TPM3-206ENST00000330188 MKS1Q9NXB0 559 aa15.04■□□□□ -0
TPM3-206ENST00000330188 HAO1Q9UJM8 370 aa15.04■□□□□ -0
TPM3-206ENST00000330188 DCTN4Q9UJW0 460 aa15.04■□□□□ -0
TPM3-206ENST00000330188 NUMBLQ9Y6R0 609 aa15.04■□□□□ -0
TPM3-206ENST00000330188 SYNJ2BP-COX16A0A087WUM0 186 aa15.03■□□□□ -0
TPM3-206ENST00000330188 TAF1BQ53T94 588 aaPredicted RBP15.03■□□□□ -0
TPM3-206ENST00000330188 MDH1BQ5I0G3 518 aa15.03■□□□□ -0
TPM3-206ENST00000330188 SYPL2Q5VXT5 272 aa15.03■□□□□ -0
TPM3-206ENST00000330188 HFE2Q6ZVN8 426 aa15.03■□□□□ -0
TPM3-206ENST00000330188 CEP57Q86XR8 500 aa15.03■□□□□ -0
TPM3-206ENST00000330188 COLGALT1Q8NBJ5 622 aa15.03■□□□□ -0
TPM3-206ENST00000330188 APBB2Q92870 758 aa15.03■□□□□ -0
TPM3-206ENST00000330188 MTBPQ96DY7 904 aa15.03■□□□□ -0
TPM3-206ENST00000330188 OXNAD1Q96HP4 312 aaPredicted RBP15.03■□□□□ -0
TPM3-206ENST00000330188 TMEM237Q96Q45 408 aa15.03■□□□□ -0
TPM3-206ENST00000330188 KATNAL1Q9BW62 490 aa15.03■□□□□ -0
TPM3-206ENST00000330188 TRIM55Q9BYV6 548 aa15.03■□□□□ -0
TPM3-206ENST00000330188 IQCGQ9H095 443 aaKnown RBP15.03■□□□□ -0
TPM3-206ENST00000330188 COX16Q9P0S2 106 aa15.03■□□□□ -0
TPM3-206ENST00000330188 ZFP69BQ9UJL9 534 aa15.03■□□□□ -0
TPM3-206ENST00000330188 PLLPQ9Y342 182 aa15.03■□□□□ -0
TPM3-206ENST00000330188 TRPM7Q96QT4 1865 aa15.03■□□□□ -0
TPM3-206ENST00000330188 HMX2A2RU54 273 aa15.02■□□□□ -0
TPM3-206ENST00000330188 MEIS3P2A8K0S8 358 aa15.02■□□□□ -0
TPM3-206ENST00000330188 F5H423 210 aaPredicted RBP15.02■□□□□ -0
TPM3-206ENST00000330188 H3BRJ5 948 aa15.02■□□□□ -0
TPM3-206ENST00000330188 M0QYT0 321 aa15.02■□□□□ -0
TPM3-206ENST00000330188 KRT38O76015 456 aa15.02■□□□□ -0
TPM3-206ENST00000330188 TGDSO95455 350 aa15.02■□□□□ -0
TPM3-206ENST00000330188 IL1BP01584 269 aa15.02■□□□□ -0
TPM3-206ENST00000330188 FAM163BP0C2L3 166 aa15.02■□□□□ -0
TPM3-206ENST00000330188 SARNPP82979 210 aaKnown RBP15.02■□□□□ -0
TPM3-206ENST00000330188 CDK16Q00536 496 aa15.02■□□□□ -0
TPM3-206ENST00000330188 E2F5Q15329 346 aa15.02■□□□□ -0
TPM3-206ENST00000330188 PARP6Q2NL67 630 aa15.02■□□□□ -0
TPM3-206ENST00000330188 STEAP4Q687X5 459 aa15.02■□□□□ -0
TPM3-206ENST00000330188 MTDHQ86UE4 582 aaKnown RBP15.02■□□□□ -0
TPM3-206ENST00000330188 HACE1Q8IYU2 909 aa15.02■□□□□ -0
TPM3-206ENST00000330188 AGAP11Q8TF27 550 aa15.02■□□□□ -0
TPM3-206ENST00000330188 INPP5DQ92835 1189 aa15.02■□□□□ -0
TPM3-206ENST00000330188 SLC7A6OSQ96CW6 309 aaPredicted RBP15.02■□□□□ -0
TPM3-206ENST00000330188 RAB3IPQ96QF0 476 aaPredicted RBP15.02■□□□□ -0
TPM3-206ENST00000330188 MED10Q9BTT4 135 aa15.02■□□□□ -0
TPM3-206ENST00000330188 LRRC4Q9HBW1 653 aa15.02■□□□□ -0
TPM3-206ENST00000330188 MOCS1Q9NZB8 636 aa15.02■□□□□ -0
TPM3-206ENST00000330188 CACNG4Q9UBN1 327 aa15.02■□□□□ -0
TPM3-206ENST00000330188 STAP1Q9ULZ2 295 aa15.02■□□□□ -0
TPM3-206ENST00000330188 Q9Y3F1 56 aa15.02■□□□□ -0
TPM3-206ENST00000330188 SF3B1O75533 1304 aaKnown RBP eCLIP15.02■□□□□ -07e-7■■■■■ 108.6
TPM3-206ENST00000330188 MYO18AQ92614 2054 aaKnown RBP15.02□□□□□ -0.01
TPM3-206ENST00000330188 KLF11O14901 512 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 CBX6O95503 412 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 NEFHP12036 1026 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 MLNP12872 115 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 GLUD2P49448 558 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 MAP3K7CLP57077 242 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 PURAQ00577 322 aaKnown RBP15.02□□□□□ -0.01
TPM3-206ENST00000330188 AP1B1Q10567 949 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 CTC1Q2NKJ3 1217 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 SIX6OS1Q8N1H7 587 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 WNT8BQ93098 351 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 TBC1D31Q96DN5 1066 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 P2RY11Q96G91 374 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 KCNK13Q9HB14 408 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 CRTAC1Q9NQ79 661 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 EIF2B3Q9NR50 452 aaKnown RBP15.02□□□□□ -0.01
TPM3-206ENST00000330188 PIGVQ9NUD9 493 aa15.02□□□□□ -0.01
TPM3-206ENST00000330188 A0A0G2JND7 137 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 WDR27A2RRH5 827 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 RNF103O00237 685 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 NRP1O14786 923 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 CREB3O43889 395 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 OPHN1O60890 802 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 FYNP06241 537 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 GNAT1P11488 350 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 CYP2B6P20813 491 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 SERPINB9P50453 376 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 RABGGTBP53611 331 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 DEUP1Q05D60 604 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 DPYSQ14117 519 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 PAFAH1B3Q15102 231 aaKnown RBP15.01□□□□□ -0.01
TPM3-206ENST00000330188 LRRC8BQ6P9F7 803 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 ZNF449Q6P9G9 518 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 CYS1Q717R9 158 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 CLNKQ7Z7G1 428 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 PDCD7Q8N8D1 485 aaKnown RBP15.01□□□□□ -0.01
TPM3-206ENST00000330188 RNF169Q8NCN4 708 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 GSTCDQ8NEC7 633 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 DEPDC1BQ8WUY9 529 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 STAMBPL1Q96FJ0 436 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 TSPYL2Q9H2G4 693 aaPredicted RBP15.01□□□□□ -0.01
TPM3-206ENST00000330188 KRT82Q9NSB4 513 aa15.01□□□□□ -0.01
TPM3-206ENST00000330188 DDX43Q9NXZ2 648 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms