RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 XPAP23025 273 aaPredicted RBP16.5■□□□□ 0.23
SYNM-201ENST00000328642 GRIA1P42261 906 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 SP3Q02447 781 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 SLC26A11Q86WA9 606 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 AFAP1L2Q8N4X5 818 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 PCSK9Q8NBP7 692 aaKnown RBP16.5■□□□□ 0.23
SYNM-201ENST00000328642 APBA2Q99767 749 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 THTPAQ9BU02 230 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 PTPRHQ9HD43 1115 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 DDX60LQ5H9U9 1706 aaKnown RBP16.5■□□□□ 0.23
SYNM-201ENST00000328642 C2orf71A6NGG8 1288 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 PHGDHO43175 533 aaKnown RBP16.5■□□□□ 0.23
SYNM-201ENST00000328642 SKAP2O75563 359 aaPredicted RBP16.5■□□□□ 0.23
SYNM-201ENST00000328642 VAPBO95292 243 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 ALDH2P05091 517 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 TSNAXIP1Q2TAA8 658 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 ANKRD20A2Q5SQ80 823 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 ANKRD20A1Q5TYW2 823 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 TAPT1Q6NXT6 567 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 LONP2Q86WA8 852 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 TRPV6Q9H1D0 765 aa16.5■□□□□ 0.23
SYNM-201ENST00000328642 B2RBV5 119 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 ATG7O95352 703 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 FGFR1P11362 822 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 PEX19P40855 299 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 SKOR1P84550 965 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 OLIG2Q13516 323 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 TAF11Q15544 211 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 SH2D4BQ5SQS7 431 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 LAYNQ6UX15 382 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 ANKRD23Q86SG2 305 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 PLD5Q8N7P1 536 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 SCAMP5Q8TAC9 235 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 SOCS4Q8WXH5 440 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 PPWD1Q96BP3 646 aaKnown RBP16.49■□□□□ 0.23
SYNM-201ENST00000328642 FOXP3Q9BZS1 431 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 DRG2P55039 364 aaKnown RBP16.49■□□□□ 0.23
SYNM-201ENST00000328642 C1orf146Q5VVC0 180 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 SYPL2Q5VXT5 272 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 GBP7Q8N8V2 638 aaPredicted RBP16.49■□□□□ 0.23
SYNM-201ENST00000328642 CPT1BQ92523 772 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 EMID1Q96A84 441 aaPredicted RBP16.49■□□□□ 0.23
SYNM-201ENST00000328642 STRA6Q9BX79 667 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 XAB2Q9HCS7 855 aaKnown RBP16.49■□□□□ 0.23
SYNM-201ENST00000328642 SLC17A6Q9P2U8 582 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 CYTH4Q9UIA0 394 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 MAP1BP46821 2468 aaKnown RBP16.49■□□□□ 0.23
SYNM-201ENST00000328642 LTBP3Q9NS15 1303 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 SPECC1L-ADORA2AF8WAN1 911 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 AOC2O75106 756 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 SPATA31D3P0C874 917 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 TNFRSF8P28908 595 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 TRIM32Q13049 653 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 SPATA31D4Q6ZUB0 917 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 SMARCD1Q96GM5 515 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 C16orf70Q9BSU1 422 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 SLC17A7Q9P2U7 560 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 PRKAG2Q9UGJ0 569 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 ANGPTL3Q9Y5C1 460 aa16.49■□□□□ 0.23
SYNM-201ENST00000328642 YJEFN3A6XGL0 299 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 E7ENQ6 273 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 PAMP19021 973 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 HNRNPH1P31943 449 aaKnown RBP16.48■□□□□ 0.23
SYNM-201ENST00000328642 NOS2P35228 1153 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 PITX1P78337 314 aaPredicted RBP16.48■□□□□ 0.23
SYNM-201ENST00000328642 ART3Q13508 389 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 KIF19Q2TAC6 998 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 HFE2Q6ZVN8 426 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 CD99L2Q8TCZ2 262 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 TMEM169Q96HH4 297 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 CXCL16Q9H2A7 254 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 DMAP1Q9NPF5 467 aaPredicted RBP16.48■□□□□ 0.23
SYNM-201ENST00000328642 MFHAS1Q9Y4C4 1052 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 PPME1Q9Y570 386 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 GRK4P32298 578 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 SCNN1BP51168 640 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 ITGA7Q13683 1181 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 ITGA9Q13797 1035 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 PDCD2Q16342 344 aaPredicted RBP16.48■□□□□ 0.23
SYNM-201ENST00000328642 FAM35AQ86V20 835 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 POU5F2Q8N7G0 328 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 TMEM40Q8WWA1 233 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 SRPK1Q96SB4 655 aaKnown RBP16.48■□□□□ 0.23
SYNM-201ENST00000328642 XYLT2Q9H1B5 865 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 ARHGEF38Q9NXL2 777 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.48■□□□□ 0.23
SYNM-201ENST00000328642 SMIM35A0A1B0GVV1 85 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 TCRBV9S1A1TA0A576 114 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 CBX4O00257 560 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 CUL3Q13618 768 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 UNC5BQ8IZJ1 945 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 TTC8Q8TAM2 541 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 PCED1BQ96HM7 432 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 KLHL5Q96PQ7 755 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 ZDHHC18Q9NUE0 388 aa16.48■□□□□ 0.23
SYNM-201ENST00000328642 UTP6Q9NYH9 597 aaKnown RBP16.48■□□□□ 0.23
SYNM-201ENST00000328642 C9IYK1 514 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 AIM2O14862 343 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 SPRP35270 261 aaPredicted RBP16.47■□□□□ 0.23
SYNM-201ENST00000328642 AQP5P55064 265 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms