RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 DNMT3LQ9UJW3 386 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 WTIPA6NIX2 430 aaPredicted RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 H2AFXP16104 143 aaPredicted RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 EEF1DP29692 281 aaKnown RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 ARL2P36404 184 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 IRGQQ8WZA9 623 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 PPP1R16AQ96I34 528 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 SELENONQ9NZV5 590 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 UBA2Q9UBT2 640 aaPredicted RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 RNF112Q9ULX5 631 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 PHRF1Q9P1Y6 1649 aaKnown RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 KANSL1LA0AUZ9 987 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 FAM163BP0C2L3 166 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 KDELR1P24390 212 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 MIPP30301 263 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 CHKAP35790 457 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 HECTD3Q5T447 861 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 RMND5AQ9H871 391 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 STARD13Q9Y3M8 1113 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 TRAV19A0A0A6YYK7 116 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 RNF103-CHMP3A0A140T963 221 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 RPN2P04844 631 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 ZNF7P17097 686 aaPredicted RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 CD151P48509 253 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 DENND1BQ6P3S1 775 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 WDR59Q6PJI9 974 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 RRM2BQ7LG56 351 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 FIBCD1Q8N539 461 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 ICA1LQ8NDH6 482 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 SPPL2BQ8TCT7 592 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 COPS5Q92905 334 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 EFR3BQ9Y2G0 817 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 GOLGA8RI6L899 631 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 VPS4BO75351 444 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 TPBGLP0DKB5 382 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 EEF1B2P24534 225 aaKnown RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 TKTP29401 623 aaKnown RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 MAD2L1Q13257 205 aaPredicted RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 MAMLD1Q13495 774 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 CHI3L2Q15782 390 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 B3GALNT2Q8NCR0 500 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 MAGEB10Q96LZ2 347 aaPredicted RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 ZMAT2Q96NC0 199 aaKnown RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 TBL1YQ9BQ87 522 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 C2orf49Q9BVC5 232 aaPredicted RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 POLR1EQ9GZS1 481 aaKnown RBP11.72□□□□□ -0.53
COL4A5-201ENST00000328300 NT5MQ9NPB1 228 aa11.72□□□□□ -0.53
COL4A5-201ENST00000328300 E5RJQ4 531 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 ATP9AO75110 1047 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 NFICP08651 508 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 SELPP16109 830 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 MLH1P40692 756 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 SLC45A4Q5BKX6 768 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 KIAA0319LQ8IZA0 1049 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 PANX3Q96QZ0 392 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 TLR10Q9BXR5 811 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 ULBP1Q9BZM6 244 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 ING2Q9H160 280 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 NMRAL1Q9HBL8 299 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 GDF3Q9NR23 364 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 NCKIPSDQ9NZQ3 722 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 ARHGAP28Q9P2N2 729 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 LNPEPQ9UIQ6 1025 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 ST3GAL5Q9UNP4 418 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 DYRK1BQ9Y463 629 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 PMM2O15305 246 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 PTPN3P26045 913 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 ALDH18A1P54886 795 aaKnown RBP11.71□□□□□ -0.53
COL4A5-201ENST00000328300 XRCC4Q13426 336 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 RGS9BPQ6ZS82 235 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 TRPM8Q7Z2W7 1104 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 ZCCHC9Q8N567 271 aaKnown RBP11.71□□□□□ -0.53
COL4A5-201ENST00000328300 ATG4AQ8WYN0 398 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 TMA16Q96EY4 203 aaKnown RBP11.71□□□□□ -0.53
COL4A5-201ENST00000328300 SEC16BQ96JE7 1060 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 VTI1BQ9UEU0 232 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 TUBGCP4Q9UGJ1 667 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 PCDHAC2Q9Y5I4 1007 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 EVPLLA8MZ36 301 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 QSOX1O00391 747 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 OR1E1P30953 314 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 DYNC1I2Q13409 638 aaKnown RBP11.71□□□□□ -0.53
COL4A5-201ENST00000328300 TP53BP2Q13625 1128 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 SPDYAQ5MJ70 313 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 MROH9Q5TGP6 573 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 SZRD1Q7Z422 152 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 PATL1Q86TB9 770 aaKnown RBP11.71□□□□□ -0.53
COL4A5-201ENST00000328300 PALB2Q86YC2 1186 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 SKA1Q96BD8 255 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 NSL1Q96IY1 281 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 OLFM3Q96PB7 478 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 SMYD3Q9H7B4 428 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 MARCH2Q9P0N8 246 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 ADAM28Q9UKQ2 775 aa11.71□□□□□ -0.53
COL4A5-201ENST00000328300 COL2A1P02458 1487 aaPredicted RBP11.71□□□□□ -0.54
COL4A5-201ENST00000328300 PPP1R11O60927 126 aaPredicted RBP11.71□□□□□ -0.54
COL4A5-201ENST00000328300 VSTM1Q6UX27 236 aa11.71□□□□□ -0.54
COL4A5-201ENST00000328300 PSTKQ8IV42 348 aaKnown RBP11.71□□□□□ -0.54
COL4A5-201ENST00000328300 TRIM48Q8IWZ4 208 aa11.71□□□□□ -0.54
COL4A5-201ENST00000328300 TMEM121Q9BTD3 319 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms