RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 FAM72BQ86X60 149 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 ANKMY2Q8IV38 441 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 PDIK1LQ8N165 341 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 CCDC110Q8TBZ0 833 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 TFB1MQ8WVM0 346 aaKnown RBP15.44■□□□□ 0.06
TPM3-205ENST00000328159 MRPL9Q9BYD2 267 aaKnown RBP15.44■□□□□ 0.06
TPM3-205ENST00000328159 GPR62Q9BZJ7 368 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 PPP1R12CQ9BZL4 782 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 KLC2Q9H0B6 622 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 WDCPQ9H6R7 721 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 CNOT10Q9H9A5 744 aaKnown RBP15.44■□□□□ 0.06
TPM3-205ENST00000328159 VPS37BQ9H9H4 285 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 ABCC13Q9NSE7 274 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 HCSTQ9UBK5 93 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 ZMYND8Q9ULU4 1186 aaPredicted RBP15.44■□□□□ 0.06
TPM3-205ENST00000328159 PCDHB5Q9Y5E4 795 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 C5orf60A6NFR6 353 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 OR6C75A6NL08 312 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 TBKBP1A7MCY6 615 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 DCLK1O15075 740 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 PARNO95453 639 aaKnown RBP15.44■□□□□ 0.06
TPM3-205ENST00000328159 IGLV3-25P01717 112 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 TPI1P60174 286 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 FAAP100Q0VG06 881 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 BBS9Q3SYG4 887 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 FAM182AQ5T1J6 154 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 BTBD8Q5XKL5 378 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 HEATR6Q6AI08 1181 aaKnown RBP15.44■□□□□ 0.06
TPM3-205ENST00000328159 ZNF280DQ6N043 979 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 PPP1R21Q6ZMI0 780 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 PYROXD1Q8WU10 500 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 C8orf48Q96LL4 319 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 TMEM175Q9BSA9 504 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 TKTL2Q9H0I9 626 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 LGALS13Q9UHV8 139 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 MICAL3Q7RTP6 2002 aa15.44■□□□□ 0.06
TPM3-205ENST00000328159 PLXNA3P51805 1871 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 E7EVH7 732 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 TRIM66O15016 1216 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 VAV1P15498 845 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 ATP5DP30049 168 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 MAGEA6P43360 314 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 MAGEA11P43364 429 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 MMP13P45452 471 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 MNX1P50219 401 aaPredicted RBP15.43■□□□□ 0.06
TPM3-205ENST00000328159 ZNF135P52742 658 aaPredicted RBP15.43■□□□□ 0.06
TPM3-205ENST00000328159 TLE2Q04725 743 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 PRKD1Q15139 912 aaPredicted RBP15.43■□□□□ 0.06
TPM3-205ENST00000328159 FAXCQ5TGI0 409 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 FUT10Q6P4F1 479 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 SCD5Q86SK9 330 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 HTR3CQ8WXA8 447 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 RNF34Q969K3 372 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 B3GALT6Q96L58 329 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 ETNK1Q9HBU6 452 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 CTNNAL1Q9UBT7 734 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 CLUHO75153 1309 aa15.43■□□□□ 0.06
TPM3-205ENST00000328159 EXOC1LA0A1B0GW35 172 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 CDH16O75309 829 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 GALTP07902 379 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 ERCC2P18074 760 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 LSP1P33241 339 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 CYP2C18P33260 490 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 GPR15P49685 360 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 GPX6P59796 221 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 ELAVL2Q12926 359 aaKnown RBP15.42■□□□□ 0.06
TPM3-205ENST00000328159 PDK1Q15118 436 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 DDR2Q16832 855 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 TRIM60Q495X7 471 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 SYCP2LQ5T4T6 812 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 CAPN12Q6ZSI9 719 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 PDZD4Q76G19 769 aaPredicted RBP15.42■□□□□ 0.06
TPM3-205ENST00000328159 TAOK1Q7L7X3 1001 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 VPS52Q8N1B4 723 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 ATP11CQ8NB49 1132 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 FBXO36Q8NEA4 188 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 PGLYRP2Q96PD5 576 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 LGMNQ99538 433 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 EPAS1Q99814 870 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 SELENOSQ9BQE4 189 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 WDR83Q9BRX9 315 aaKnown RBP15.42■□□□□ 0.06
TPM3-205ENST00000328159 FRMD8Q9BZ67 464 aaPredicted RBP15.42■□□□□ 0.06
TPM3-205ENST00000328159 CRISPLD2Q9H0B8 497 aa15.42■□□□□ 0.06
TPM3-205ENST00000328159 PPP1R12AO14974 1030 aaPredicted RBP15.41■□□□□ 0.06
TPM3-205ENST00000328159 IRAK2O43187 625 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 METTL18O95568 372 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 PHBP35232 272 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 PGFP49763 221 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 PPARDQ03181 441 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 CBLBQ13191 982 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 EIF4EBP2Q13542 120 aaPredicted RBP15.41■□□□□ 0.06
TPM3-205ENST00000328159 CCDC38Q502W7 563 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 SDHAF4Q5VUM1 108 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 ARHGEF18Q6ZSZ5 1173 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 DEFB128Q7Z7B8 93 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 EXOC3L1Q86VI1 746 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 NUP93Q8N1F7 819 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 LRRC43Q8N309 656 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 RIBC1Q8N443 379 aaPredicted RBP15.41■□□□□ 0.06
TPM3-205ENST00000328159 NETO2Q8NC67 525 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms