RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 PRPF39Q86UA1 669 aaKnown RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 ATAD1Q8NBU5 361 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 PIP4K2CQ8TBX8 421 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 TMA16Q96EY4 203 aaKnown RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 APBA2Q99767 749 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 LRRC4CQ9HCJ2 640 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 NOP53Q9NZM5 478 aaKnown RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 MPP6Q9NZW5 540 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 MOSPD1Q9UJG1 213 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 MID2Q9UJV3 735 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 NCF1BA6NI72 391 aaPredicted RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 NCF1CA8MVU1 366 aaPredicted RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 F9P00740 461 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 ASGR1P07306 291 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 F7P08709 466 aaPredicted RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 NCF1P14598 390 aaPredicted RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 OGDHQ02218 1023 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 CA9Q16790 459 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 TMTC4Q5T4D3 741 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 ZNF618Q5T7W0 954 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 RNF219Q5W0B1 726 aaPredicted RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 FRA10AC1Q70Z53 315 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 POLNQ7Z5Q5 900 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 KIRREL3Q8IZU9 778 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 UPF1Q92900 1129 aaKnown RBP eCLIP12.17□□□□□ -0.461e-7■■■■□ 23.7
DDR1-223ENST00000324771 FBXL18Q96ME1 805 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 MAGEB5Q9BZ81 275 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 IL1RL2Q9HB29 575 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 PIDD1Q9HB75 910 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 PCDH18Q9HCL0 1135 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 ETNK2Q9NVF9 386 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 CHD4Q14839 1912 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 MARF1Q9Y4F3 1742 aaKnown RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 SNX2O60749 519 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 ZWINTO95229 277 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 CYP1A1P04798 512 aaPredicted RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 IL1R2P27930 398 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 NME5P56597 212 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 SMARCD1Q96GM5 515 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 LRGUKQ96M69 825 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 SRPK1Q96SB4 655 aaKnown RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 SENP6Q9GZR1 1112 aaPredicted RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 DMAP1Q9NPF5 467 aaPredicted RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.17□□□□□ -0.46
DDR1-223ENST00000324771 PADI3Q9ULW8 664 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 PPME1Q9Y570 386 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 TJP1Q07157 1748 aa12.17□□□□□ -0.46
DDR1-223ENST00000324771 CDKN2BP42772 138 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 HARS2P49590 506 aaKnown RBP12.16□□□□□ -0.46
DDR1-223ENST00000324771 MAPRE1Q15691 268 aaKnown RBP12.16□□□□□ -0.46
DDR1-223ENST00000324771 SH3D19Q5HYK7 790 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 ANKRD20A2Q5SQ80 823 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 ANKRD20A1Q5TYW2 823 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 POU5F2Q8N7G0 328 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 SOCS4Q8WXH5 440 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 MYLPFQ96A32 169 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 DNAJC16Q9Y2G8 782 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 STXBP5LQ9Y2K9 1186 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 PAPSS1O43252 624 aaPredicted RBP12.16□□□□□ -0.46
DDR1-223ENST00000324771 CCR1P32246 355 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 NOS2P35228 1153 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 ALDH1A3P47895 512 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 SERPINB9P50453 376 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 GAD2Q05329 585 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 NOL9Q5SY16 702 aaKnown RBP12.16□□□□□ -0.46
DDR1-223ENST00000324771 N4BP2L1Q5TBK1 243 aaPredicted RBP12.16□□□□□ -0.46
DDR1-223ENST00000324771 SPATA24Q86W54 205 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 RIBC1Q8N443 379 aaPredicted RBP12.16□□□□□ -0.46
DDR1-223ENST00000324771 SPATA6LQ8N4H0 392 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 MREGQ8N565 214 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 GANCQ8TET4 914 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 EXOC2Q96KP1 924 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 RHOBTB2Q9BYZ6 727 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 TMPRSS4Q9NRS4 437 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 LAMA4Q16363 1823 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 BTAF1O14981 1849 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 NDUFS3O75489 264 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 SPAG6O75602 509 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 FDFT1P37268 417 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 ASPAP45381 313 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 DRG2P55039 364 aaKnown RBP12.16□□□□□ -0.46
DDR1-223ENST00000324771 SKOR1P84550 965 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 MPP3Q13368 585 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 ZRANB3Q5FWF4 1079 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 RASIP1Q5U651 963 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 MAGEB18Q96M61 343 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 MECRQ9BV79 373 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 GRHL1Q9NZI5 618 aa12.16□□□□□ -0.46
DDR1-223ENST00000324771 NWD2Q9ULI1 1742 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 E9PBE3 544 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 KLHL41O60662 606 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 PTGIRP43119 386 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 SERPINB4P48594 390 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 CRYBB1P53674 252 aaPredicted RBP12.15□□□□□ -0.46
DDR1-223ENST00000324771 LILRA4P59901 499 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 SP3Q02447 781 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 CSHL1Q14406 222 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 CYB5D1Q6P9G0 228 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 LCA5Q86VQ0 697 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 PHF21BQ96EK2 531 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms