RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 ASB7Q9H672 318 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 KRCC1Q9NPI7 259 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 KPNA6O60684 536 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 PSMD10O75832 226 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 AKAP5P24588 427 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 AXLP30530 894 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 CCR1P32246 355 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 ILF2Q12905 390 aaKnown RBP11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 AGKQ53H12 422 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 SCARA3Q6AZY7 606 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 BHMTQ93088 406 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 FAM163AQ96GL9 167 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 ZC4H2Q9NQZ6 224 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 ETNK2Q9NVF9 386 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 HOXA2O43364 376 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 ATP6V1B2P21281 511 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 KDELR1P24390 212 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 RHOAP61586 193 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 POU6F1Q14863 301 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 ZNF410Q86VK4 478 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 ZFPM1Q8IX07 1006 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 GLIS3Q8NEA6 775 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 MMADHCQ9H3L0 296 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 XPNPEP3Q9NQH7 507 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 APOC4-APOC2K7ER74 178 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 RNF103O00237 685 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 ACKR2O00590 384 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 APOC2P02655 101 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 SHBGP04278 402 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 MIPP30301 263 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 MAMLD1Q13495 774 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 C11orf74Q86VG3 221 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 RIN3Q8TB24 985 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 EDEM1Q92611 657 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 ZBTB45Q96K62 511 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 CPSF4O95639 269 aaKnown RBP11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 HMGCRP04035 888 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 CCNG1P51959 295 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 ITGB3BPQ13352 177 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 POMKQ9H5K3 350 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 AAASQ9NRG9 546 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 PCYOX1Q9UHG3 505 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 CHADO15335 359 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 PCNAP12004 261 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 ALOX15P16050 662 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 MFSD10Q14728 455 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 TCHHL1Q5QJ38 904 aaPredicted RBP11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 TBCELQ5QJ74 424 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 HAS1Q92839 578 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 SAR1AQ9NR31 198 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 COMMD8Q9NX08 183 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 DYRK1BQ9Y463 629 aa11.18□□□□□ -0.62
SNRNP200-201ENST00000323853 MROH7Q68CQ1 1323 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 F8W810 466 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 ADRB2P07550 413 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 PBLDP30039 288 aaPredicted RBP11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 RRM2P31350 389 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 RAB27AP51159 221 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 RENBPP51606 427 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 PAN2Q504Q3 1202 aaKnown RBP11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 WDR59Q6PJI9 974 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 SCUBE3Q8IX30 993 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 DNAJB3Q8WWF6 145 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 AKT1S1Q96B36 256 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 HPS4Q9NQG7 708 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 RBM22Q9NW64 420 aaKnown RBP eCLIP11.17□□□□□ -0.621e-6■■■□□ 15.8
SNRNP200-201ENST00000323853 USP20Q9Y2K6 914 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 C3P01024 1663 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 FSBPO95073 299 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 RAG1P15918 1043 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 SERPINB1P30740 379 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 SDE2Q6IQ49 451 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 ZNF280DQ6N043 979 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 LRRC55Q6ZSA7 311 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 ART4Q93070 314 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 TMEM79Q9BSE2 394 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 PIH1D1Q9NWS0 290 aaKnown RBP11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 H3BRB1 525 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 ETS1P14921 441 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 BMP6P22004 513 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 CXCL9Q07325 125 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 PPP3CAQ08209 521 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 DACT2Q5SW24 774 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 DDHD1Q8NEL9 900 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 LPCAT1Q8NF37 534 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 MKL1Q969V6 931 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 GLT1D1Q96MS3 346 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 TUT1Q9H6E5 874 aaKnown RBP11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 NMRAL1Q9HBL8 299 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 VPS28Q9UK41 221 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 STARD13Q9Y3M8 1113 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 FAM58BPP0C7Q3 252 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 ACAT1P24752 427 aaKnown RBP11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 ALLCQ8N6M5 410 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 PHF21AQ96BD5 680 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 SH3GL1Q99961 368 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 PRKD2Q9BZL6 878 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 PORCNQ9H237 461 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 PRDM16Q9HAZ2 1276 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms