RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 KLHL30Q0D2K2 578 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 NME3Q13232 169 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 EIF4EBP2Q13542 120 aaPredicted RBP16.07■□□□□ 0.16
TSFM-201ENST00000323833 ADGRF1Q5T601 910 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 OTUD1Q5VV17 481 aaPredicted RBP16.07■□□□□ 0.16
TSFM-201ENST00000323833 NADSYN1Q6IA69 706 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 TRNP1Q6NT89 227 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 RFWD3Q6PCD5 774 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 PHF13Q86YI8 300 aaPredicted RBP16.07■□□□□ 0.16
TSFM-201ENST00000323833 SYNPOQ8N3V7 929 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 DDI1Q8WTU0 396 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 XPO6Q96QU8 1125 aaKnown RBP16.07■□□□□ 0.16
TSFM-201ENST00000323833 RBSNQ9H1K0 784 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 C2orf42Q9NWW7 574 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 DDIT4Q9NX09 232 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 TAS2R14Q9NYV8 317 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 ADAM22Q9P0K1 906 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 CALCOCO1Q9P1Z2 691 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 DEC1Q9P2X7 70 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 XPO7Q9UIA9 1087 aaKnown RBP16.07■□□□□ 0.16
TSFM-201ENST00000323833 STOML2Q9UJZ1 356 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 TMEM59LQ9UK28 342 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 SSUH2Q9Y2M2 353 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 ITIH6Q6UXX5 1313 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 DOCK4Q8N1I0 1966 aa16.07■□□□□ 0.16
TSFM-201ENST00000323833 TMCO5BA8MYB1 307 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.06■□□□□ 0.16
TSFM-201ENST00000323833 M0QYT0 321 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 PENKP01210 267 aaPredicted RBP16.06■□□□□ 0.16
TSFM-201ENST00000323833 CYBBP04839 570 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 CASP14P31944 242 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 GBP1P32455 592 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 SLC11A2P49281 568 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 SULT1E1P49888 294 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 SGSHP51688 502 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 PTPN5P54829 565 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 ZBED6P86452 979 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 SATB1Q01826 763 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 FAM133BQ5BKY9 247 aaKnown RBP16.06■□□□□ 0.16
TSFM-201ENST00000323833 GRAMD4Q6IC98 578 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 ACAD10Q6JQN1 1059 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 TSSK4Q6SA08 328 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 MON1BQ7L1V2 547 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 GAS2L3Q86XJ1 694 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 SPEM1Q8N4L4 309 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 EMC1Q8N766 993 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 RPLP0P6Q8NHW5 317 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 RNF34Q969K3 372 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 AZIN2Q96A70 460 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 NPY6RQ99463 290 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 CLEC4EQ9ULY5 219 aa16.06■□□□□ 0.16
TSFM-201ENST00000323833 LUC7L2Q9Y383 392 aaKnown RBP16.06■□□□□ 0.16
TSFM-201ENST00000323833 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.06■□□□□ 0.16
TSFM-201ENST00000323833 A0A0A0MRY4 1105 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 GFRA2O00451 464 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 APOEP02649 317 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 CALB1P05937 261 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 CISD3P0C7P0 127 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 GRIA2P42262 883 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 DGKGP49619 791 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 CSTF1Q05048 431 aaKnown RBP16.05■□□□□ 0.16
TSFM-201ENST00000323833 FBXO43Q4G163 708 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 MPPE1Q53F39 396 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 C2orf27AQ580R0 203 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 EMC10Q5UCC4 262 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 HGSNATQ68CP4 663 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 DNAAF5Q86Y56 855 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 VSTM4Q8IW00 320 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 JOSD2Q8TAC2 188 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 IQCDQ96DY2 449 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 TMA16Q96EY4 203 aaKnown RBP16.05■□□□□ 0.16
TSFM-201ENST00000323833 MYEOVQ96EZ4 313 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 CFAP57Q96MR6 1250 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 TBCBQ99426 244 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 IER2Q9BTL4 223 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 NUCKS1Q9H1E3 243 aaKnown RBP16.05■□□□□ 0.16
TSFM-201ENST00000323833 FAM86C1Q9NVL1 165 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 POLR3BQ9NW08 1133 aaPredicted RBP16.05■□□□□ 0.16
TSFM-201ENST00000323833 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.05■□□□□ 0.16
TSFM-201ENST00000323833 FBXO10Q9UK96 956 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 STAP1Q9ULZ2 295 aa16.05■□□□□ 0.16
TSFM-201ENST00000323833 TBC1D3BA6NDS4 549 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 KCNU1A8MYU2 1149 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 DDX3XO00571 662 aaKnown RBP eCLIP16.04■□□□□ 0.169e-9■■■■□ 25.9
TSFM-201ENST00000323833 PLEKP08567 350 aaPredicted RBP16.04■□□□□ 0.16
TSFM-201ENST00000323833 SP9P0CG40 484 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 HOXD9P28356 352 aaPredicted RBP16.04■□□□□ 0.16
TSFM-201ENST00000323833 HOXC13P31276 330 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 CXCL12P48061 93 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 ATXN1P54253 815 aaKnown RBP16.04■□□□□ 0.16
TSFM-201ENST00000323833 TDRD12Q587J7 1177 aaKnown RBP16.04■□□□□ 0.16
TSFM-201ENST00000323833 PIK3R6Q5UE93 754 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 RAP1GAP2Q684P5 730 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 SPECC1LQ69YQ0 1117 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 MAMSTRQ6ZN01 415 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 MCOLN2Q8IZK6 566 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 ATP6V0D2Q8N8Y2 350 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 TERB1Q8NA31 727 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 USP33Q8TEY7 942 aa16.04■□□□□ 0.16
TSFM-201ENST00000323833 SYN2Q92777 582 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms