RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 FAM98CQ17RN3 349 aaKnown RBP8.04□□□□□ -1.12
CD46-201ENST00000322875 KCTD21Q4G0X4 260 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 DEPDC1Q5TB30 811 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 LGSNQ5TDP6 509 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 ITPRIPL1Q6GPH6 555 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 SNRNP48Q6IEG0 339 aaKnown RBP8.04□□□□□ -1.12
CD46-201ENST00000322875 CYS1Q717R9 158 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 EEPD1Q7L9B9 569 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 THNSL1Q8IYQ7 743 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 TRIML2Q8N7C3 387 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 FAM71DQ8N9W8 422 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 GMCL1P1Q8NEA9 526 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 RTP4Q96DX8 246 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 CCDC97Q96F63 343 aaPredicted RBP8.04□□□□□ -1.12
CD46-201ENST00000322875 DUS3LQ96G46 650 aaKnown RBP8.04□□□□□ -1.12
CD46-201ENST00000322875 UHRF1Q96T88 793 aaPredicted RBP8.04□□□□□ -1.12
CD46-201ENST00000322875 GPATCH1Q9BRR8 931 aaKnown RBP8.04□□□□□ -1.12
CD46-201ENST00000322875 FRMD8Q9BZ67 464 aaPredicted RBP8.04□□□□□ -1.12
CD46-201ENST00000322875 NUF2Q9BZD4 464 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 C1orf112Q9NSG2 853 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 PNPLA3Q9NST1 481 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 B3GNT3Q9Y2A9 372 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 MYRFQ9Y2G1 1151 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 PCDHAC2Q9Y5I4 1007 aa8.04□□□□□ -1.12
CD46-201ENST00000322875 LOC100653049A0A140TA62 436 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 TMX2-CTNND1H3BSU7 103 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 APOC4-APOC2K7ER74 178 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 SLC16A4O15374 487 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 CLASP2O75122 1294 aaKnown RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 KRT34O76011 436 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 KRT38O76015 456 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 VNN1O95497 513 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 APOEP02649 317 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 APOC2P02655 101 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 C4BPAP04003 597 aaKnown RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 OCM2P0CE71 109 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 OCMP0CE72 109 aaPredicted RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 KDELR1P24390 212 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 PSMD8P48556 350 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 NRLP54845 237 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 IKBKEQ14164 716 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 PPP2R5DQ14738 602 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 ZACNQ401N2 412 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 VWA5B1Q5TIE3 1220 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 FASTKD5Q7L8L6 764 aaKnown RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 ZNF420Q8TAQ5 688 aaPredicted RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 ACMSDQ8TDX5 336 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 RSAD2Q8WXG1 361 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 CCDC17Q96LX7 622 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 GPR101Q96P66 508 aaPredicted RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 MCEEQ96PE7 176 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 TRIM56Q9BRZ2 755 aaKnown RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 RPF2Q9H7B2 306 aaKnown RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 APOBEC3GQ9HC16 384 aaKnown RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 TBC1D22BQ9NU19 505 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 NCKIPSDQ9NZQ3 722 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 IPO11Q9UI26 975 aaKnown RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 GNPTGQ9UJJ9 305 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 SLC8A2Q9UPR5 921 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 TRIM17Q9Y577 477 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 SLC15A5A6NIM6 579 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 PSMD12O00232 456 aaPredicted RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 DCXO43602 365 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 TBC1D12O60347 775 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 PLIN3O60664 434 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 GRK2P25098 689 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 GNA15P30679 374 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 BASP1P80723 227 aaKnown RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 TAP1Q03518 808 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 FLOT2Q14254 428 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 SHROOM1Q2M3G4 852 aaPredicted RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 CEP55Q53EZ4 464 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 RSPH3Q86UC2 560 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 CPNE9Q8IYJ1 553 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 DSELQ8IZU8 1212 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 CPSF7Q8N684 471 aaKnown RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 STON2Q8WXE9 905 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 SLC7A3Q8WY07 619 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 LENG8Q96PV6 779 aaPredicted RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 TSPAN18Q96SJ8 248 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 SERPINI1Q99574 410 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 RIT2Q99578 217 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 EIF2AQ9BY44 585 aaKnown RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 MAN1C1Q9NR34 630 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 DUS2Q9NX74 493 aaKnown RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 PTBP2Q9UKA9 531 aaKnown RBP8.03□□□□□ -1.12
CD46-201ENST00000322875 DOLKQ9UPQ8 538 aa8.03□□□□□ -1.12
CD46-201ENST00000322875 H3BMQ9 156 aa8.02□□□□□ -1.12
CD46-201ENST00000322875 SLC22A2O15244 555 aa8.02□□□□□ -1.12
CD46-201ENST00000322875 DHX15O43143 795 aaKnown RBP8.02□□□□□ -1.12
CD46-201ENST00000322875 ERBB2P04626 1255 aa8.02□□□□□ -1.12
CD46-201ENST00000322875 CDH5P33151 784 aaPredicted RBP8.02□□□□□ -1.12
CD46-201ENST00000322875 STAT2P52630 851 aa8.02□□□□□ -1.12
CD46-201ENST00000322875 KCNQ4P56696 695 aa8.02□□□□□ -1.12
CD46-201ENST00000322875 GRAPQ13588 217 aa8.02□□□□□ -1.12
CD46-201ENST00000322875 RFTN1Q14699 578 aaPredicted RBP8.02□□□□□ -1.12
CD46-201ENST00000322875 MOGQ16653 247 aa8.02□□□□□ -1.12
CD46-201ENST00000322875 FSCBQ5H9T9 825 aa8.02□□□□□ -1.12
CD46-201ENST00000322875 NHSL2Q5HYW2 709 aa8.02□□□□□ -1.12
CD46-201ENST00000322875 MFSD14BQ5SR56 506 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms