RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ME2P23368 584 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 ACLYP53396 1101 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 LIN54Q6MZP7 749 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 OLFML1Q6UWY5 402 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 REPS1Q96D71 796 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 FBXO28Q9NVF7 368 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 DDIT4Q9NX09 232 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 CASP4P49662 377 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 EPHA10Q5JZY3 1008 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 SPDYCQ5MJ68 293 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 CHID1Q9BWS9 393 aa17.28■□□□□ 0.36
SMCHD1-201ENST00000320876 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 BCLAF3A2AJT9 711 aaKnown RBP17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 ITGA4P13612 1032 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 ZNF177Q13360 481 aaPredicted RBP17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 INO80DQ53TQ3 878 aaPredicted RBP17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 MED8Q96G25 268 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 L1RE1Q9UN81 338 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 MAPRE3Q9UPY8 281 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 IDH3BO43837 385 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 BCAP31P51572 246 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 TKFCQ3LXA3 575 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 C8orf59Q8N0T1 100 aaPredicted RBP17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 C15orf38-AP3S2A0A0A6YYH1 394 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 F5H5T6 163 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 M0QYT0 321 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 RIPK2O43353 540 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 TNFRSF21O75509 655 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 TOP3AQ13472 1001 aaPredicted RBP17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 PKN1Q16512 942 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 TMC3Q7Z5M5 1100 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 ARPINQ7Z6K5 226 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 ITFG1Q8TB96 612 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 SIK3Q9Y2K2 1263 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 XRRA1Q6P2D8 792 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 STX12Q86Y82 276 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 PCDH9Q9HC56 1237 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 AGPAT3Q9NRZ7 376 aa17.27■□□□□ 0.36
SMCHD1-201ENST00000320876 FLT1P17948 1338 aa17.27■□□□□ 0.35
SMCHD1-201ENST00000320876 NANOGNBQ7Z5D8 188 aa17.27■□□□□ 0.35
SMCHD1-201ENST00000320876 NET1Q7Z628 596 aaPredicted RBP17.27■□□□□ 0.35
SMCHD1-201ENST00000320876 CDK5RAP1Q96SZ6 601 aaKnown RBP17.27■□□□□ 0.35
SMCHD1-201ENST00000320876 DPP3Q9NY33 737 aa17.27■□□□□ 0.35
SMCHD1-201ENST00000320876 MYCP01106 439 aaPredicted RBP17.27■□□□□ 0.35
SMCHD1-201ENST00000320876 VAV1P15498 845 aa17.27■□□□□ 0.35
SMCHD1-201ENST00000320876 STOX1Q6ZVD7 989 aa17.27■□□□□ 0.35
SMCHD1-201ENST00000320876 LENG1Q96BZ8 264 aaPredicted RBP17.27■□□□□ 0.35
SMCHD1-201ENST00000320876 ASB2Q96Q27 587 aa17.27■□□□□ 0.35
SMCHD1-201ENST00000320876 SH3GLB1Q9Y371 365 aa17.27■□□□□ 0.35
SMCHD1-201ENST00000320876 FAM196BA6NMK8 535 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 KYAT3Q6YP21 454 aaKnown RBP17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 DHRSXQ8N5I4 330 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 ZNF671Q8TAW3 534 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 ERVK-24P63145 666 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 SPP2Q13103 211 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 CCNG2Q16589 344 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 ACTRT2Q8TDY3 377 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 ACSF2Q96CM8 615 aaPredicted RBP17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 TFR2Q9UP52 801 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 F9P00740 461 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 CDK7P50613 346 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 SPIRE1Q08AE8 756 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 PGBD3Q8N328 593 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 AMER2Q8N7J2 671 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 ANKEF1Q9NU02 776 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 TBC1D13Q9NVG8 400 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 ERVK-10P10266 1014 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 BCAT1P54687 386 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 FCHO2Q0JRZ9 810 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 CAMK1DQ8IU85 385 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 PROX1Q92786 737 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 RIBC2Q9H4K1 309 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 E9PCH4 1651 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 A0A087X0T9 212 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 FAM228BP0C875 321 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 PSMD4P55036 377 aaKnown RBP17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 N4BP2L1Q5TBK1 243 aaPredicted RBP17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 DDI2Q5TDH0 399 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 NACC2Q96BF6 587 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 BCL2L14Q9BZR8 327 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 GALNT8Q9NY28 637 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 NAALADL1Q9UQQ1 740 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 AFF2P51816 1311 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 UBE2QL1A1L167 161 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 ITGB3P05106 788 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 NAB1Q13506 487 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 NECAB2Q7Z6G3 386 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 TSPAN14Q8NG11 270 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 TRPC4Q9UBN4 977 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 KIAA1210Q9ULL0 1709 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 S100A13Q99584 98 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 DGCR6LQ9BY27 220 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 KIAA1257Q9ULG3 409 aa17.26■□□□□ 0.35
SMCHD1-201ENST00000320876 NR3C2P08235 984 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 ARHGAP15Q53QZ3 475 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 BROXQ5VW32 411 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 Q96MT0 163 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 KCNK4Q9NYG8 393 aa17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 CHORDC1Q9UHD1 332 aaPredicted RBP17.25■□□□□ 0.35
SMCHD1-201ENST00000320876 MGAT5Q09328 741 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms