RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 BFARQ9NZS9 450 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 SPRP35270 261 aaPredicted RBP17.06■□□□□ 0.32
PACS1-201ENST00000320580 DHFR2Q86XF0 187 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 RSAD1Q9HA92 442 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 STK39Q9UEW8 545 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 RGPD5Q99666 1765 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 RIC1Q4ADV7 1423 aa17.06■□□□□ 0.32
PACS1-201ENST00000320580 NOTOA8MTQ0 251 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 K7EPI3 171 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 DLDP09622 509 aaKnown RBP17.05■□□□□ 0.32
PACS1-201ENST00000320580 INPP1P49441 399 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 OSTNP61366 133 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 DGKDQ16760 1214 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 DOK7Q18PE1 504 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 SV2AQ7L0J3 742 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 FBXO27Q8NI29 283 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 KLHL8Q9P2G9 620 aaPredicted RBP17.05■□□□□ 0.32
PACS1-201ENST00000320580 PRPF19Q9UMS4 504 aaKnown RBP17.05■□□□□ 0.32
PACS1-201ENST00000320580 RGSL1A5PLK6 1076 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 TSPAN9O75954 239 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 BAIAP3O94812 1187 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 ACAT1P24752 427 aaKnown RBP17.05■□□□□ 0.32
PACS1-201ENST00000320580 LSM3P62310 102 aaKnown RBP17.05■□□□□ 0.32
PACS1-201ENST00000320580 SLC10A5Q5PT55 438 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 ARCQ7LC44 396 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 CAMK1DQ8IU85 385 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 DENND1AQ8TEH3 1009 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 MMP19Q99542 508 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 NOL11Q9H8H0 719 aaKnown RBP17.05■□□□□ 0.32
PACS1-201ENST00000320580 DGKBQ9Y6T7 804 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 AVILO75366 819 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 MT-CO1P00395 513 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 NR4A1P22736 598 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 GLRBP48167 497 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 ZBTB41Q5SVQ8 909 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 GPAT2Q6NUI2 795 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 C16orf86Q6ZW13 317 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 BPIFB6Q8NFQ5 453 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 HTRA1Q92743 480 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 SLITRK1Q96PX8 696 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 VPS33BQ9H267 617 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 SUN2Q9UH99 717 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 DRG1Q9Y295 367 aaKnown RBP17.05■□□□□ 0.32
PACS1-201ENST00000320580 ZC3H11AO75152 810 aaKnown RBP eCLIP17.05■□□□□ 0.32
PACS1-201ENST00000320580 KLRK1P26718 216 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 QARSP47897 775 aaKnown RBP17.05■□□□□ 0.32
PACS1-201ENST00000320580 MAP3K7CLP57077 242 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 ABCE1P61221 599 aaKnown RBP17.05■□□□□ 0.32
PACS1-201ENST00000320580 DPYSL3Q14195 570 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 ZNF846Q147U1 533 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 POLD3Q15054 466 aaPredicted RBP17.05■□□□□ 0.32
PACS1-201ENST00000320580 ZNF423Q2M1K9 1284 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 ZNF829Q3KNS6 432 aaPredicted RBP17.05■□□□□ 0.32
PACS1-201ENST00000320580 FNBP1LQ5T0N5 605 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 IFNLR1Q8IU57 520 aaPredicted RBP17.05■□□□□ 0.32
PACS1-201ENST00000320580 SLC7A5P1Q8MH63 180 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 CHID1Q9BWS9 393 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 ZFYVE28Q9HCC9 887 aa17.05■□□□□ 0.32
PACS1-201ENST00000320580 TYROBPO43914 113 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 SNX2O60749 519 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 MAGP20916 626 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 SCARA3Q6AZY7 606 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 AKAP14Q86UN6 197 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 PSMA8Q8TAA3 256 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 C12orf43Q96C57 262 aaKnown RBP17.04■□□□□ 0.32
PACS1-201ENST00000320580 KCNQ5Q9NR82 932 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 DDX43Q9NXZ2 648 aaKnown RBP17.04■□□□□ 0.32
PACS1-201ENST00000320580 HESX1Q9UBX0 185 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 CROTQ9UKG9 612 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 A0A1W2PPW3 197 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 PTGES3LE9PB15 166 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 TTC30AQ86WT1 665 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 POC5Q8NA72 575 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 SLC44A1Q8WWI5 657 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 FAM149B1Q96BN6 582 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 HEXIM2Q96MH2 286 aaKnown RBP17.04■□□□□ 0.32
PACS1-201ENST00000320580 HEPHQ9BQS7 1158 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 COQ10BQ9H8M1 238 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 SLC39A10Q9ULF5 831 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 K7ERI5 159 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 PSMD11O00231 422 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 RAD51BO15315 384 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 OXSR1O95747 527 aaPredicted RBP17.04■□□□□ 0.32
PACS1-201ENST00000320580 PIK3R1P27986 724 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 USP10Q14694 798 aaKnown RBP17.04■□□□□ 0.32
PACS1-201ENST00000320580 PABPC1LQ4VXU2 614 aaKnown RBP17.04■□□□□ 0.32
PACS1-201ENST00000320580 ZNF410Q86VK4 478 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 HORMAD1Q86X24 394 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 FAM156AQ8NDB6 213 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 GIPC2Q8TF65 315 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 TRIM63Q969Q1 353 aa17.04■□□□□ 0.32
PACS1-201ENST00000320580 LENG8Q96PV6 779 aaPredicted RBP17.04■□□□□ 0.32
PACS1-201ENST00000320580 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.04■□□□□ 0.32
PACS1-201ENST00000320580 RBAKQ9NYW8 714 aaPredicted RBP17.04■□□□□ 0.32
PACS1-201ENST00000320580 FUOMA2VDF0 154 aa17.03■□□□□ 0.32
PACS1-201ENST00000320580 NTSR2O95665 410 aa17.03■□□□□ 0.32
PACS1-201ENST00000320580 ALOX5P09917 674 aa17.03■□□□□ 0.32
PACS1-201ENST00000320580 HADHBP55084 474 aaKnown RBP17.03■□□□□ 0.32
PACS1-201ENST00000320580 NME5P56597 212 aa17.03■□□□□ 0.32
PACS1-201ENST00000320580 ANKRD22Q5VYY1 191 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms