RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 MALRD1Q5VYJ5 2156 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 MYO18BQ8IUG5 2567 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 BPTFQ12830 3046 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 CCDC182A6NF36 153 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 IL18RAPO95256 599 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 LDLRP01130 860 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 PHKG2P15735 406 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 RPA1P27694 616 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 LTKP29376 864 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 PRELPP51888 382 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 TMBIM6P55061 237 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 SNAP25P60880 206 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 KCTD21Q4G0X4 260 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 SDE2Q6IQ49 451 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 C11orf74Q86VG3 221 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 TBC1D10CQ8IV04 446 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 TBC1D21Q8IYX1 336 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 UNC5BQ8IZJ1 945 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 NDUFAF2Q8N183 169 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 FBXW8Q8N3Y1 598 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 PPM1NQ8N819 430 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 C15orf40Q8WUR7 153 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 GLG1Q92896 1179 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 CPNE1Q99829 537 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 TRIM51Q9BSJ1 452 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 ACAD9Q9H845 621 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 NUP188Q5SRE5 1749 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 PP2D1A8MPX8 630 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 FANCGO15287 622 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 PMM2O15305 246 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 GPIP06744 558 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 CRABP2P29373 138 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 ACADSBP45954 432 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 ERFP50548 548 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 KCNJ2P63252 427 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 SPIRE1Q08AE8 756 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 PABPC4Q13310 644 aaKnown RBP eCLIP4.63□□□□□ -1.673e-6■■■■□ 26.6
CNOT1-201ENST00000317147 IL18R1Q13478 541 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 EZH2Q15910 746 aaKnown RBP4.63□□□□□ -1.67
CNOT1-201ENST00000317147 DEPDC1Q5TB30 811 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 RSBN1Q5VWQ0 802 aaPredicted RBP4.63□□□□□ -1.67
CNOT1-201ENST00000317147 PIWIL4Q7Z3Z4 852 aaKnown RBP4.63□□□□□ -1.67
CNOT1-201ENST00000317147 TRABD2AQ86V40 505 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 DHRSXQ8N5I4 330 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 SPERTQ8NA61 448 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 SUPT20HQ8NEM7 779 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 TMC2Q8TDI7 906 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 TCF12Q99081 682 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 VAT1Q99536 393 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 HOPXQ9BPY8 73 aaPredicted RBP4.63□□□□□ -1.67
CNOT1-201ENST00000317147 APOL2Q9BQE5 337 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 CALN1Q9BXU9 219 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 HSD3B7Q9H2F3 369 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 WDR70Q9NW82 654 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 SELENONQ9NZV5 590 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 POLG2Q9UHN1 485 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 GGA1Q9UJY5 639 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 THRAP3Q9Y2W1 955 aaKnown RBP4.63□□□□□ -1.67
CNOT1-201ENST00000317147 COQ6Q9Y2Z9 468 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 NRXN3Q9Y4C0 1643 aa4.63□□□□□ -1.67
CNOT1-201ENST00000317147 GSC2O15499 205 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 PDPK1O15530 556 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 PLEKHA8P1O95397 391 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 ADAMTS2O95450 1211 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 IFNA16P05015 189 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 RARAP10276 462 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 PIK3R1P27986 724 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 TTLL12Q14166 644 aaPredicted RBP4.62□□□□□ -1.67
CNOT1-201ENST00000317147 LRRC14Q15048 493 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 CYP1B1Q16678 543 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 TRIQKQ629K1 86 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 RIPOR1Q6ZS17 1223 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 BNIPLQ7Z465 357 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 DEFB107AQ8IZN7 70 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 C8orf59Q8N0T1 100 aaPredicted RBP4.62□□□□□ -1.67
CNOT1-201ENST00000317147 DEPDC4Q8N2C3 294 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 C19orf18Q8NEA5 215 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 AGR3Q8TD06 166 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 GPR101Q96P66 508 aaPredicted RBP4.62□□□□□ -1.67
CNOT1-201ENST00000317147 ORAI2Q96SN7 254 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 ZBED2Q9BTP6 218 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 PTTG3PQ9NZH4 202 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 SLAIN2Q9P270 581 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF221Q9UK13 617 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 SORL1Q92673 2214 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 A0A087X0T9 212 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 HOXC6P09630 235 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 FAM228BP0C875 321 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 ITIH1P19827 911 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 GNA15P30679 374 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 PTPN7P35236 360 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 CDK9P50750 372 aaKnown RBP4.62□□□□□ -1.67
CNOT1-201ENST00000317147 NME5P56597 212 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 TNK2Q07912 1038 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 SQLEQ14534 574 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 AARS2Q5JTZ9 985 aaKnown RBP4.62□□□□□ -1.67
CNOT1-201ENST00000317147 NAPEPLDQ6IQ20 393 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 MAEAQ7L5Y9 396 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 SMARCAD1Q9H4L7 1026 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 CPNE5Q9HCH3 593 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms