RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 SYPP08247 313 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 TPMTP51580 245 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 ZNF132P52740 706 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 COPAP53621 1224 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 SLC8A3P57103 927 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 ZNF658Q5TYW1 1059 aaPredicted RBP18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 UBR7Q8N806 425 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 UCMAQ8WVF2 138 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 DNASE2BQ8WZ79 361 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 EDEM1Q92611 657 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 ERCC4Q92889 916 aaPredicted RBP18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 PLD4Q96BZ4 506 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 SLC2A11Q9BYW1 496 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 CIPCQ9C0C6 399 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 KLK13Q9UKR3 277 aa18.25■□□□□ 0.51
EXOSC4-201ENST00000316052 YJEFN3A6XGL0 299 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 E7ENQ6 273 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 SLC16A3O15427 465 aaKnown RBP18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 SYNCRIPO60506 623 aaKnown RBP18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 GABBR2O75899 941 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 CD19P15391 556 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 HOXD9P28356 352 aaPredicted RBP18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 BCAT1P54687 386 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 ADIGQ0VDE8 80 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 LRMPQ12912 555 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 COBLL1Q53SF7 1204 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 SGO2Q562F6 1265 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 WDR45BQ5MNZ6 344 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 BSPRYQ5W0U4 402 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 SIPA1Q96FS4 1042 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 LRRC4Q9HBW1 653 aa18.24■□□□□ 0.51
EXOSC4-201ENST00000316052 TRIM49BA6NDI0 452 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 O00370 1275 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 SH3BP5O60239 455 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 VDRP11473 427 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 NCAM1P13591 858 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 HLA-EP13747 358 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 GNSP15586 552 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 HLA-FP30511 346 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 HARS2P49590 506 aaKnown RBP18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 FKBP3Q00688 224 aaKnown RBP18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 BST2Q10589 180 aaKnown RBP18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 GRIK2Q13002 908 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 EIF4HQ15056 248 aaKnown RBP18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 PKDCCQ504Y2 493 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 CACUL1Q86Y37 369 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 SPATA20Q8TB22 786 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 TFAP2BQ92481 460 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 SLC35C1Q96A29 364 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 IPO9Q96P70 1041 aaKnown RBP18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 GSDMAQ96QA5 445 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 OLA1Q9NTK5 396 aaKnown RBP18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 RMND1Q9NWS8 449 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 HESX1Q9UBX0 185 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 SUSD2Q9UGT4 822 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 STOML2Q9UJZ1 356 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 HBS1LQ9Y450 684 aaKnown RBP18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 NEUROG3Q9Y4Z2 214 aa18.23■□□□□ 0.51
EXOSC4-201ENST00000316052 MSI1O43347 362 aaKnown RBP18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 TIMM44O43615 452 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 IGLV3-19P01714 112 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 EPHX1P07099 455 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 OXTRP30559 389 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 SLC14A1Q13336 389 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 MPPE1Q53F39 396 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 DCAF12L1Q5VU92 463 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 CHCHD4Q8N4Q1 142 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 ZCCHC9Q8N567 271 aaKnown RBP18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 ENGASEQ8NFI3 743 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 CADM4Q8NFZ8 388 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 RNF139Q8WU17 664 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 CYB5D2Q8WUJ1 264 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 KCTD13Q8WZ19 329 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 PRCCQ92733 491 aaPredicted RBP18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 TSG101Q99816 390 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 ZSWIM1Q9BR11 485 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 ARMCX3Q9UH62 379 aaPredicted RBP18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 MSRB2Q9Y3D2 182 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 NFE2L3Q9Y4A8 694 aa18.22■□□□□ 0.51
EXOSC4-201ENST00000316052 ATRXP46100 2492 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 A0A1B0GTW7 788 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 METTL12A8MUP2 240 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 MEI4A8MW99 385 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 RNF225M0QZC1 329 aaPredicted RBP18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 CALCAP01258 141 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 LCP1P13796 627 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 RGS7P49802 495 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 SGSHP51688 502 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 BNC1Q01954 994 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 ADGRF1Q5T601 910 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 LCLAT1Q6UWP7 414 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 SERPINA13PQ6UXR4 307 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 ADIPOR2Q86V24 386 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 SIX6OS1Q8N1H7 587 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 C1orf216Q8TAB5 229 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 SLC35F5Q8WV83 523 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 TMA16Q96EY4 203 aaKnown RBP18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 CCDC34Q96HJ3 373 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 NUP58Q9BVL2 599 aa18.21■□□□□ 0.51
EXOSC4-201ENST00000316052 MIR1-1HGQ9H1L0 117 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms