RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 DEFB107AQ8IZN7 70 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 AGO4Q9HCK5 861 aaKnown RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 DYRK4Q9NR20 520 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 ADAM30Q9UKF2 790 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 MYRFQ9Y2G1 1151 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 CNOT3O75175 753 aaKnown RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 GLRA3O75311 464 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 EIF2S1P05198 315 aaKnown RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 S100A9P06702 114 aaKnown RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 HIST1H2AGP0C0S8 130 aaPredicted RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 PDGFRAP16234 1089 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 HIST1H2ADP20671 130 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 BGNP21810 368 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 SOAT1P35610 550 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 FNTAP49354 379 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 SERPINH1P50454 418 aaKnown RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 PEX5P50542 639 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 HSD17B4P51659 736 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 IL5RAQ01344 420 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 TCHHL1Q5QJ38 904 aaPredicted RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 SNX31Q8N9S9 440 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 SGF29Q96ES7 293 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 HIST1H2AHQ96KK5 128 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 HIST1H2AJQ99878 128 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 H2AFJQ9BTM1 129 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 GRIP2Q9C0E4 1043 aa8.41□□□□□ -1.06
VPS41-202ENST00000310301 MRPL39Q9NYK5 338 aaKnown RBP8.41□□□□□ -1.06
VPS41-202ENST00000310301 CNTNAP5Q8WYK1 1306 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 CNTNAP1P78357 1384 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 PEX1O43933 1283 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 H2AFYO75367 372 aaKnown RBP8.4□□□□□ -1.06
VPS41-202ENST00000310301 NDUFS3O75489 264 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 PTPN7P35236 360 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 DGUOKQ16854 277 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 ZNF618Q5T7W0 954 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 SLC13A5Q86YT5 568 aaPredicted RBP8.4□□□□□ -1.06
VPS41-202ENST00000310301 FUKQ8N0W3 1084 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 PPTC7Q8NI37 304 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 NARS2Q96I59 477 aaKnown RBP8.4□□□□□ -1.06
VPS41-202ENST00000310301 ROGDIQ9GZN7 287 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 MRPL17Q9NRX2 175 aaKnown RBP8.4□□□□□ -1.06
VPS41-202ENST00000310301 CHORDC1Q9UHD1 332 aaPredicted RBP8.4□□□□□ -1.06
VPS41-202ENST00000310301 DUSP10Q9Y6W6 482 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 KANSL1LA0AUZ9 987 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 MEI4A8MW99 385 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 E9PBE3 544 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 DNM1LO00429 736 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 KLHL41O60662 606 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 CST8O60676 142 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 CYP11B2P19099 503 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 AVPR1AP37288 418 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 NAMPTP43490 491 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 NFIL3Q16649 462 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 TBCELQ5QJ74 424 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 FAM45BPQ6NSW5 357 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 C11orf88Q6PI97 169 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 ISLR2Q6UXK2 745 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 MIER2Q8N344 545 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 KRT35Q92764 455 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 MKNK1Q9BUB5 465 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 KRT84Q9NSB2 600 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 CTNNAL1Q9UBT7 734 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 KLHL3Q9UH77 587 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 FAM20BO75063 409 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 SGPL1O95470 568 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 GRIK1P39086 918 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 TAF6P49848 677 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 TLE2Q04725 743 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 STK4Q13043 487 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 NCF4Q15080 339 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 NFE2Q16621 373 aaPredicted RBP8.4□□□□□ -1.06
VPS41-202ENST00000310301 SMTNL2Q2TAL5 461 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 OTOAQ7RTW8 1153 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 EFL1Q7Z2Z2 1120 aaKnown RBP8.4□□□□□ -1.06
VPS41-202ENST00000310301 ENKURQ8TC29 256 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 ZFP42Q96MM3 310 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 C11orf84Q9BUA3 381 aaPredicted RBP8.4□□□□□ -1.06
VPS41-202ENST00000310301 TMEM165Q9HC07 324 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 MBD2Q9UBB5 411 aa8.4□□□□□ -1.06
VPS41-202ENST00000310301 FAM205CA6NFA0 338 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 ARVCFO00192 962 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 DDHD2O94830 711 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 SERPIND1P05546 499 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 SMIM10L2AP0DMW4 78 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 SMIM10L2BP0DMW5 78 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 RARGP13631 454 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 ACLYP53396 1101 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 MGAT5BQ3V5L5 792 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 PPM1LQ5SGD2 360 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 PAPD7Q5XG87 772 aaKnown RBP8.4□□□□□ -1.07
VPS41-202ENST00000310301 PLPPR4Q7Z2D5 763 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 TMPRSS6Q8IU80 811 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 C4orf19Q8IY42 314 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 UXS1Q8NBZ7 420 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 CCSER1Q9C0I3 900 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 PORCNQ9H237 461 aa8.4□□□□□ -1.07
VPS41-202ENST00000310301 CDC42EP4Q9H3Q1 356 aaKnown RBP8.4□□□□□ -1.07
VPS41-202ENST00000310301 NCAM2O15394 837 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 APOA4P06727 396 aa8.39□□□□□ -1.07
VPS41-202ENST00000310301 ADH1AP07327 375 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms