RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 FAM172AQ8WUF8 416 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 NECAB3Q96P71 396 aaPredicted RBP18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 ECT2Q9H8V3 914 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 CD320Q9NPF0 282 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 AGO1Q9UL18 857 aaKnown RBP18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 PCDHA13Q9Y5I0 950 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 WNT6Q9Y6F9 365 aa18.59■□□□□ 0.57
SSSCA1-201ENST00000309328 A0A0A6YYK5 440 aaPredicted RBP18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 FAM170AA1A519 330 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 KCNU1A8MYU2 1149 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 ACSL4O60488 711 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 MTA2O94776 668 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 KLKB1P03952 638 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 PTMAP06454 111 aaKnown RBP18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 PCK1P35558 622 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 ARHGAP25P42331 645 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 ZXDAP98168 799 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 ATP11AP98196 1134 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 GAD2Q05329 585 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 ZC3H12AQ5D1E8 599 aaKnown RBP18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 TRNP1Q6NT89 227 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 RALGPS2Q86X27 583 aaPredicted RBP18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 NTAN1Q96AB6 310 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 HAPLN3Q96S86 360 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 SPHK2Q9NRA0 654 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 PIGVQ9NUD9 493 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 ARHGEF38Q9NXL2 777 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 MARK1Q9P0L2 795 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 ANAPC7Q9UJX3 599 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 FBXL21Q9UKT6 434 aa18.58■□□□□ 0.56
SSSCA1-201ENST00000309328 NCOR1O75376 2440 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 SYNJ2BP-COX16A0A087WUM0 186 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 MAN2B1O00754 1011 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 HOXC11O43248 304 aaPredicted RBP18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 EIF2DP41214 584 aaKnown RBP18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 PITX1P78337 314 aaPredicted RBP18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 SIGLEC14Q08ET2 396 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 CCDC173Q0VFZ6 552 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 CDO1Q16878 200 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 MPP7Q5T2T1 576 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 TTC39BQ5VTQ0 682 aaPredicted RBP18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 OTUD1Q5VV17 481 aaPredicted RBP18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 RAD9BQ6WBX8 426 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 SUGP1Q8IWZ8 645 aaKnown RBP18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 EDAQ92838 391 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 C1orf74Q96LT6 269 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 EBF3Q9H4W6 596 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 COX16Q9P0S2 106 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 TTC28Q96AY4 2481 aa18.57■□□□□ 0.56
SSSCA1-201ENST00000309328 BTNL10A8MVZ5 291 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 CCP110O43303 1012 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 GJB6O95452 261 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 MAN1A1P33908 653 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 VAV2P52735 878 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 HADHBP55084 474 aaKnown RBP18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 SCAPQ12770 1279 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 DHCR24Q15392 516 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 C15orf59Q2T9L4 293 aaPredicted RBP18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 MPPE1Q53F39 396 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 KIAA1328Q86T90 577 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 DNAAF5Q86Y56 855 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 PSTKQ8IV42 348 aaKnown RBP18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 ST13P5Q8NFI4 369 aaPredicted RBP18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 ARHGEF26Q96DR7 871 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 ASIC4Q96FT7 647 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 ZFYVE19Q96K21 471 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 PACSIN1Q9BY11 444 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 TSGA10Q9BZW7 698 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 TKTL2Q9H0I9 626 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 LINC00597Q9H2U6 94 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 RETREG1Q9H6L5 497 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 HPS4Q9NQG7 708 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 ARHGEF3Q9NR81 526 aa18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 MRPS17Q9Y2R5 130 aaKnown RBP18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 HELZP42694 1942 aaKnown RBP18.56■□□□□ 0.56
SSSCA1-201ENST00000309328 F5H5T6 163 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 TNFRSF10AO00220 468 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 NARSO43776 548 aaKnown RBP18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 MOCS2O96007 188 aaPredicted RBP18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 CYP17A1P05093 508 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 ADH5P11766 374 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 ZNF135P52742 658 aaPredicted RBP18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 HDAC4P56524 1084 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 MLF2Q15773 248 aaPredicted RBP18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 IFI16Q16666 785 aaKnown RBP18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 SLC44A4Q53GD3 710 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 RABGAP1LQ5R372 815 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 TRIM68Q6AZZ1 485 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 NUDT18Q6ZVK8 323 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 FAM131BQ86XD5 332 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 HJURPQ8NCD3 748 aaPredicted RBP18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 CCDC26Q8TAB7 109 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 SLC35G2Q8TBE7 412 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 XPO6Q96QU8 1125 aaKnown RBP18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 PIAS3Q9Y6X2 628 aa18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 TCF20Q9UGU0 1960 aaKnown RBP18.55■□□□□ 0.56
SSSCA1-201ENST00000309328 PI4K2BG5E9Z4 385 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 PJA2O43164 708 aa18.54■□□□□ 0.56
SSSCA1-201ENST00000309328 PRPSAP2O60256 369 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms