RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 MAP3K20Q9NYL2 800 aaKnown RBP11.48□□□□□ -0.57
PTPN7-201ENST00000309017 LMCD1Q9NZU5 365 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 BTBD7Q9P203 1132 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 NR2E3Q9Y5X4 410 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 AP4B1Q9Y6B7 739 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 STYXL1Q9Y6J8 313 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.48□□□□□ -0.57
PTPN7-201ENST00000309017 GARSP41250 739 aaKnown RBP11.48□□□□□ -0.57
PTPN7-201ENST00000309017 HDAC4P56524 1084 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 CYLC2Q14093 348 aaPredicted RBP11.48□□□□□ -0.57
PTPN7-201ENST00000309017 NADK2Q4G0N4 442 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 FBXL19Q6PCT2 694 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 TMC7Q7Z402 723 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 LRRC71Q8N4P6 559 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 LRRC39Q96DD0 335 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 XPNPEP3Q9NQH7 507 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 SSX2IPQ9Y2D8 614 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 AK5Q9Y6K8 562 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 PLIN3O60664 434 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 METTL18O95568 372 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 HNRNPCP07910 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTPN7-201ENST00000309017 GRK2P25098 689 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 ZNF143P52747 638 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-201ENST00000309017 ABCE1P61221 599 aaKnown RBP11.47□□□□□ -0.57
PTPN7-201ENST00000309017 ART3Q13508 389 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 TLR1Q15399 786 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 SPDYE2Q495Y8 402 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 MBLAC2Q68D91 279 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 ABHD15Q6UXT9 468 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 CDRT15Q96T59 188 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 CEP41Q9BYV8 373 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 USP29Q9HBJ7 922 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 PDLIM7Q9NR12 457 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 ACSS2Q9NR19 701 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 ZDHHC7Q9NXF8 308 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 DCDC2Q9UHG0 476 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 BCAP29Q9UHQ4 241 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 FAF1Q9UNN5 650 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-201ENST00000309017 SIPA1L1O43166 1804 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 CPA3P15088 417 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 ASPAP45381 313 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 TMEM259Q4ZIN3 620 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 SNX32Q86XE0 403 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 FAM210AQ96ND0 272 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 RPF1Q9H9Y2 349 aaKnown RBP11.47□□□□□ -0.57
PTPN7-201ENST00000309017 ZNF358Q9NW07 568 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 PTTG2Q9NZH5 202 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 HMGXB4Q9UGU5 601 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 PCDHA11Q9Y5I1 949 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 CDY2AQ9Y6F7 541 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 CDY1Q9Y6F8 540 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 YDJCA8MPS7 323 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 STRNO43815 780 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 STBD1O95210 358 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 FGF3P11487 239 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-201ENST00000309017 MCCD1P59942 119 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-201ENST00000309017 PDE1CQ14123 709 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-201ENST00000309017 EEPD1Q7L9B9 569 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 CCNYQ8ND76 341 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 TFB1MQ8WVM0 346 aaKnown RBP11.47□□□□□ -0.57
PTPN7-201ENST00000309017 NCSTNQ92542 709 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 WNK4Q96J92 1243 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 ZNF778Q96MU6 729 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 BTBD9Q96Q07 612 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 GCOM2Q9BZD3 368 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-201ENST00000309017 PSMD13Q9UNM6 376 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 PHF24Q9UPV7 400 aa11.47□□□□□ -0.57
PTPN7-201ENST00000309017 SF3B1O75533 1304 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTPN7-201ENST00000309017 FAM159BA6NKW6 160 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 TNFAIP8O95379 198 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 ITGB3P05106 788 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 ADORA2AP29274 412 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 CDH5P33151 784 aaPredicted RBP11.46□□□□□ -0.57
PTPN7-201ENST00000309017 ABCG1P45844 678 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 BOLA3Q53S33 107 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 XRRA1Q6P2D8 792 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 RSBN1LQ6PCB5 846 aaPredicted RBP11.46□□□□□ -0.57
PTPN7-201ENST00000309017 KLHDC10Q6PID8 442 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 CMC1Q7Z7K0 106 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 TMEM130Q8N3G9 435 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 NETO2Q8NC67 525 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 PHF12Q96QT6 1004 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 PPP1R16BQ96T49 567 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 LHX5Q9H2C1 402 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 STN1Q9H668 368 aaKnown RBP11.46□□□□□ -0.57
PTPN7-201ENST00000309017 COG4Q9H9E3 785 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 TMEM216Q9P0N5 145 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 XPO1O14980 1071 aaKnown RBP11.46□□□□□ -0.57
PTPN7-201ENST00000309017 CXCL8P10145 99 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 CNTFP26441 200 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 GBE1Q04446 702 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 KLF10Q13118 480 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 C6orf52Q5T4I8 152 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 KLC3Q6P597 504 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 PACS1Q6VY07 963 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 BNC2Q6ZN30 1099 aaPredicted RBP11.46□□□□□ -0.57
PTPN7-201ENST00000309017 SLC4A11Q8NBS3 891 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 TMA16Q96EY4 203 aaKnown RBP11.46□□□□□ -0.57
PTPN7-201ENST00000309017 TMEM176AQ96HP8 235 aa11.46□□□□□ -0.57
PTPN7-201ENST00000309017 SIGLEC10Q96LC7 697 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms