RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 PLIN5Q00G26 463 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 PLEKHA7Q6IQ23 1121 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 IFNL1Q8IU54 200 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 BANPQ8N9N5 519 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 NLRP7Q8WX94 980 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 CENPKQ9BS16 269 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 OXCT2Q9BYC2 517 aaPredicted RBP15.04■□□□□ -0
PTPN9-201ENST00000306726 PIF1Q9H611 641 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 LIN28AQ9H9Z2 209 aaKnown RBP15.04■□□□□ -0
PTPN9-201ENST00000306726 NRBP2Q9NSY0 501 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 ASNSD1Q9NWL6 643 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 KLHL8Q9P2G9 620 aaPredicted RBP15.04■□□□□ -0
PTPN9-201ENST00000306726 HESX1Q9UBX0 185 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 APOL1O14791 398 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 DKC1O60832 514 aaKnown RBP eCLIP15.04■□□□□ -0
PTPN9-201ENST00000306726 ADORA2AP29274 412 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 EPHA3P29320 983 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 DLG1Q12959 904 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 TSNARE1Q96NA8 513 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 CATSPER2Q96P56 530 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 OMDQ99983 421 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 C20orf27Q9GZN8 174 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 C20orf96Q9NUD7 363 aaPredicted RBP15.04■□□□□ -0
PTPN9-201ENST00000306726 GTSE1Q9NYZ3 720 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 BTBD7Q9P203 1132 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 UBIAD1Q9Y5Z9 338 aa15.04■□□□□ -0
PTPN9-201ENST00000306726 STRNO43815 780 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 MX2P20592 715 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 COPAP53621 1224 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
PTPN9-201ENST00000306726 GRIK3Q13003 919 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 ART3Q13508 389 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 TMEM132BQ14DG7 1078 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 SLFN12LQ6IEE8 588 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 TRIM72Q6ZMU5 477 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 LCA5Q86VQ0 697 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 DCUN1D5Q9BTE7 237 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 NUF2Q9BZD4 464 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 KLHL4Q9C0H6 718 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 SLC39A10Q9ULF5 831 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 RPS6KL1Q9Y6S9 549 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 TPP1O14773 563 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 TBL3Q12788 808 aaKnown RBP15.03■□□□□ -0
PTPN9-201ENST00000306726 SLC12A1Q13621 1099 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 PDK1Q15118 436 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 KCTD21Q4G0X4 260 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 STKLD1Q8NE28 680 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 DCAKDQ8WVC6 231 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 ZNF669Q96BR6 464 aaPredicted RBP15.03■□□□□ -0
PTPN9-201ENST00000306726 CFHR5Q9BXR6 569 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 SIK2Q9H0K1 926 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 CAAP1Q9H8G2 361 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 ANKEF1Q9NU02 776 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 DDX56Q9NY93 547 aaKnown RBP15.03■□□□□ -0
PTPN9-201ENST00000306726 TAGLN3Q9UI15 199 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 AGRPO00253 132 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 PHGDHO43175 533 aaKnown RBP15.03■□□□□ -0
PTPN9-201ENST00000306726 TFE3P19532 575 aaPredicted RBP15.03■□□□□ -0
PTPN9-201ENST00000306726 CAPSQ13938 189 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 SEPT6Q14141 434 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 TAF1CQ15572 869 aaPredicted RBP15.03■□□□□ -0
PTPN9-201ENST00000306726 IRGCQ6NXR0 463 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 TMPRSS6Q8IU80 811 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 C10orf107Q8IVU9 208 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 PCDH20Q8N6Y1 951 aaKnown RBP15.03■□□□□ -0
PTPN9-201ENST00000306726 TRIML2Q8N7C3 387 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 DNERQ8NFT8 737 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 CAPNS2Q96L46 248 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 ETAA1Q9NY74 926 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 CYTH4Q9UIA0 394 aa15.03■□□□□ -0
PTPN9-201ENST00000306726 FOXD2O60548 495 aaPredicted RBP15.02■□□□□ -0
PTPN9-201ENST00000306726 CYP1A1P04798 512 aaPredicted RBP15.02■□□□□ -0
PTPN9-201ENST00000306726 TMEM198Q66K66 360 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 TRPV6Q9H1D0 765 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 TMEM165Q9HC07 324 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 RNASEH1O60930 286 aaKnown RBP15.02■□□□□ -0
PTPN9-201ENST00000306726 OATP04181 439 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 SLC1A6P48664 564 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 CXCR3P49682 368 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 YWHAEP62258 255 aaKnown RBP15.02■□□□□ -0
PTPN9-201ENST00000306726 STXBP2Q15833 593 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 EFHC1Q5JVL4 640 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 TTC13Q8NBP0 860 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 CLEC4CQ8WTT0 213 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 ECSITQ9BQ95 431 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 MRPL4Q9BYD3 311 aaKnown RBP15.02■□□□□ -0
PTPN9-201ENST00000306726 KRT82Q9NSB4 513 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 ARHGAP26Q9UNA1 814 aa15.02■□□□□ -0
PTPN9-201ENST00000306726 THSD7BQ9C0I4 1608 aa15.02□□□□□ -0.01
PTPN9-201ENST00000306726 MICAL2O94851 1124 aa15.02□□□□□ -0.01
PTPN9-201ENST00000306726 ACADSP16219 412 aa15.02□□□□□ -0.01
PTPN9-201ENST00000306726 HADHBP55084 474 aaKnown RBP15.02□□□□□ -0.01
PTPN9-201ENST00000306726 MAP7Q14244 749 aa15.02□□□□□ -0.01
PTPN9-201ENST00000306726 EFHC2Q5JST6 749 aa15.02□□□□□ -0.01
PTPN9-201ENST00000306726 PPM1LQ5SGD2 360 aa15.02□□□□□ -0.01
PTPN9-201ENST00000306726 KCNT2Q6UVM3 1135 aa15.02□□□□□ -0.01
PTPN9-201ENST00000306726 NIPA1Q7RTP0 329 aa15.02□□□□□ -0.01
PTPN9-201ENST00000306726 PHTF2Q8N3S3 785 aa15.02□□□□□ -0.01
PTPN9-201ENST00000306726 KIF12Q96FN5 646 aa15.02□□□□□ -0.01
PTPN9-201ENST00000306726 CDRT15Q96T59 188 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms