RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 PLEKP08567 350 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TYRP14679 529 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PDGFRAP16234 1089 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 GPD1P21695 349 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 DRD1P21728 446 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 RRM1P23921 792 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 AVPR2P30518 371 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 HNRNPH3P31942 346 aaKnown RBP11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 RDXP35241 583 aaKnown RBP11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 FLT3P36888 993 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PITX1P78337 314 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 KDSRQ06136 332 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PPP2R5DQ14738 602 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CDO1Q16878 200 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 MPPE1Q53F39 396 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ZC3H12AQ5D1E8 599 aaKnown RBP11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 DGKKQ5KSL6 1271 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 BRMS1LQ5PSV4 323 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ADGRF1Q5T601 910 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CHSY1Q86X52 802 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TMEM25Q86YD3 366 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CCDC117Q8IWD4 279 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 FAM217AQ8IXS0 508 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 EMC1Q8N766 993 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 NAT16Q8N8M0 369 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CCDC26Q8TAB7 109 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 BHMTQ93088 406 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 AZIN2Q96A70 460 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CHFRQ96EP1 664 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PGAP3Q96FM1 320 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 SLC39A13Q96H72 371 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CFAP57Q96MR6 1250 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PNKPQ96T60 521 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TBCBQ99426 244 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 NPY6RQ99463 290 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 IER2Q9BTL4 223 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PARVAQ9NVD7 372 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 DNAJC17Q9NVM6 304 aaKnown RBP11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ARHGAP20Q9P2F6 1191 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CNOT8Q9UFF9 292 aaKnown RBP11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TMEM59LQ9UK28 342 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 HCN4Q9Y3Q4 1203 aa11.42□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 SSU72P8A0A1W2PR75 194 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 SIGLEC16A6NMB1 481 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 F5H5T6 163 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ATMINO43313 823 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 AKR1B10O60218 316 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CACNG3O60359 315 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TSPAN3O60637 253 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 GJB6O95452 261 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 EIF4A3P38919 411 aaKnown RBP11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 OPRD1P41143 372 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ATP11AP98196 1134 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ARID5BQ14865 1188 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 FBXO43Q4G163 708 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TMEM196Q5HYL7 178 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CCDC122Q5T0U0 273 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 GRAMD4Q6IC98 578 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ALKBH5Q6P6C2 394 aaKnown RBP11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 C12orf40Q86WS4 652 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TMEM105Q8N8V8 129 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ZNF557Q8N988 423 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 HJURPQ8NCD3 748 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 RXFP2Q8WXD0 754 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CCDC42Q96M95 316 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 IRX2Q9BZI1 471 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 WDCPQ9H6R7 721 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 LMAN1LQ9HAT1 526 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 MRPL47Q9HD33 250 aaKnown RBP11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ARHGEF4Q9NR80 690 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PLK2Q9NYY3 685 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 DEC1Q9P2X7 70 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 MYO1AQ9UBC5 1043 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 STOML2Q9UJZ1 356 aa11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 MTF2Q9Y483 593 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 MYO18AQ92614 2054 aaKnown RBP11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 A0A087X0T9 212 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 C2CD4BA6NLJ0 364 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 KCNU1A8MYU2 1149 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PI15O43692 258 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TULP3O75386 442 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 EGFP01133 1207 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PENKP01210 267 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 FAM228BP0C875 321 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CHRNB1P11230 501 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CDC25BP30305 580 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 GRIA2P42262 883 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PTPN9P43378 593 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 RPS9P46781 194 aaKnown RBP11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 DGKGP49619 791 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 GALK1P51570 392 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 NUBP1P53384 320 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TBX2Q13207 712 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 MAPK8IP2Q13387 824 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 SLC18A3Q16572 532 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 C15orf59Q2T9L4 293 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ARL13BQ3SXY8 428 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 FAM133BQ5BKY9 247 aaKnown RBP11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 RABGAP1LQ5R372 815 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ACBD5Q5T8D3 534 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms