RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ACTL7BQ9Y614 415 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 KBTBD13C9JR72 458 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 H3BRJ5 948 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 ARVCFO00192 962 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 TNFRSF10BO14763 440 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 NBNO60934 754 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 TYMPP19971 482 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 MAGEA3P43357 314 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 CXCR3P49682 368 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 GEMIN4P57678 1058 aaKnown RBP6.77□□□□□ -1.33
USP47-201ENST00000305481 EIF4EBP2Q13542 120 aaPredicted RBP6.77□□□□□ -1.33
USP47-201ENST00000305481 PAFAH1B3Q15102 231 aaKnown RBP6.77□□□□□ -1.33
USP47-201ENST00000305481 NOMO2Q5JPE7 1267 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 GLB1LQ6UWU2 654 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 SRLQ86TD4 932 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 PALM2Q8IXS6 379 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 MZB1Q8WU39 189 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 TFB1MQ8WVM0 346 aaKnown RBP6.77□□□□□ -1.33
USP47-201ENST00000305481 HTR3CQ8WXA8 447 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 HMX1Q9NP08 348 aaPredicted RBP6.77□□□□□ -1.33
USP47-201ENST00000305481 KCNK9Q9NPC2 374 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 DMAP1Q9NPF5 467 aaPredicted RBP6.77□□□□□ -1.33
USP47-201ENST00000305481 TBC1D13Q9NVG8 400 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.77□□□□□ -1.33
USP47-201ENST00000305481 SLC24A2Q9UI40 661 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 PCDHB8Q9UN66 801 aa6.77□□□□□ -1.33
USP47-201ENST00000305481 RRP15Q9Y3B9 282 aaKnown RBP6.77□□□□□ -1.33
USP47-201ENST00000305481 TCRBV9S1A1TA0A576 114 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 EEF2KO00418 725 aaKnown RBP6.76□□□□□ -1.33
USP47-201ENST00000305481 CDK7P50613 346 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 YWHAHQ04917 246 aaPredicted RBP6.76□□□□□ -1.33
USP47-201ENST00000305481 TCTN1Q2MV58 587 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 ADGRD1Q6QNK2 874 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 C6orf89Q6UWU4 347 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 PRPF39Q86UA1 669 aaKnown RBP6.76□□□□□ -1.33
USP47-201ENST00000305481 TAC4Q86UU9 113 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 LRRC34Q8IZ02 419 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 SCML4Q8N228 414 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 ANKRD42Q8N9B4 389 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 ZNF296Q8WUU4 475 aaPredicted RBP6.76□□□□□ -1.33
USP47-201ENST00000305481 DCAKDQ8WVC6 231 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 IRGQQ8WZA9 623 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 P2RY11Q96G91 374 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 TRIM56Q9BRZ2 755 aaKnown RBP6.76□□□□□ -1.33
USP47-201ENST00000305481 KLC2Q9H0B6 622 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 FETUBQ9UGM5 382 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 PHF24Q9UPV7 400 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 TTC3P53804 2025 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 HACD1B0YJ81 288 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 OAZ2O95190 189 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 GNRH1P01148 92 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 IGLV3-25P01717 112 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 ERCC2P18074 760 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 PAX3P23760 479 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 GRK4P32298 578 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 VEGFBP49765 207 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 AIF1P55008 147 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 WDR4P57081 412 aaKnown RBP6.76□□□□□ -1.33
USP47-201ENST00000305481 WASHC5Q12768 1159 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 ANKRD20A2Q5SQ80 823 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 ARTNQ5T4W7 220 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 ANKRD20A1Q5TYW2 823 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 ANKRD20A3Q5VUR7 823 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 HEATR6Q6AI08 1181 aaKnown RBP6.76□□□□□ -1.33
USP47-201ENST00000305481 LRRC8DQ7L1W4 858 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 THEM5Q8N1Q8 247 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 MPP5Q8N3R9 675 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 NPWQ8N729 165 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 STKLD1Q8NE28 680 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 MCUQ8NE86 351 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 DENND1AQ8TEH3 1009 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 SEC16BQ96JE7 1060 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 CEP41Q9BYV8 373 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 PRDM12Q9H4Q4 367 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 PNPLA8Q9NP80 782 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 PSMC3IPQ9P2W1 217 aaPredicted RBP6.76□□□□□ -1.33
USP47-201ENST00000305481 FAM169AQ9Y6X4 670 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 SF3B1O75533 1304 aaKnown RBP eCLIP6.76□□□□□ -1.33
USP47-201ENST00000305481 PATJQ8NI35 1801 aa6.76□□□□□ -1.33
USP47-201ENST00000305481 A0A0A0MRY4 1105 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 F5H423 210 aaPredicted RBP6.75□□□□□ -1.33
USP47-201ENST00000305481 SPAG7O75391 227 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 TSHRP16473 764 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 PHBP35232 272 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 GLUD2P49448 558 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 SEMA5AQ13591 1074 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 C4orf22Q6V702 233 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 DENND5BQ6ZUT9 1274 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 PIGWQ7Z7B1 504 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 SCD5Q86SK9 330 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 VPS52Q8N1B4 723 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 GDAP1Q8TB36 358 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 SIGLEC10Q96LC7 697 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 SPATA13Q96N96 652 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 PAFAH2Q99487 392 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 TKTL2Q9H0I9 626 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 TRABDQ9H4I3 376 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 PRDM16Q9HAZ2 1276 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 TMEM189-UBE2V1I3L0A0 370 aa6.75□□□□□ -1.33
USP47-201ENST00000305481 RNF103O00237 685 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms