RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 TKTL2Q9H0I9 626 aa11.77□□□□□ -0.53
SCG2-201ENST00000305409 PRDM12Q9H4Q4 367 aa11.77□□□□□ -0.53
SCG2-201ENST00000305409 CNGB3Q9NQW8 809 aa11.77□□□□□ -0.53
SCG2-201ENST00000305409 FGFR1OP2Q9NVK5 253 aa11.77□□□□□ -0.53
SCG2-201ENST00000305409 SFMBT1Q9UHJ3 866 aa11.77□□□□□ -0.53
SCG2-201ENST00000305409 ZNF638Q14966 1978 aaKnown RBP11.77□□□□□ -0.53
SCG2-201ENST00000305409 C9IYK1 514 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 NT5C1B-RDH14C9J2C7 533 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 UGT1A9O60656 530 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 SOAT2O75908 522 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 ERCC2P18074 760 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 ATP5DP30049 168 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 RPA3P35244 121 aaPredicted RBP11.76□□□□□ -0.53
SCG2-201ENST00000305409 GEMIN4P57678 1058 aaKnown RBP11.76□□□□□ -0.53
SCG2-201ENST00000305409 SPRED3Q2MJR0 410 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 FAM171BQ6P995 826 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 TAC4Q86UU9 113 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 CTAGE3PQ8IX95 158 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 UNC5BQ8IZJ1 945 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 VPS52Q8N1B4 723 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 P2RY11Q96G91 374 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 CELF6Q96J87 481 aaKnown RBP11.76□□□□□ -0.53
SCG2-201ENST00000305409 QKIQ96PU8 341 aaKnown RBP eCLIP11.76□□□□□ -0.53
SCG2-201ENST00000305409 ACBD6Q9BR61 282 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 UGT1A7Q9HAW7 530 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 UGT1A10Q9HAW8 530 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 UGT1A8Q9HAW9 530 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 TEX264Q9Y6I9 313 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 CXorf49A8MYA2 514 aaPredicted RBP11.76□□□□□ -0.53
SCG2-201ENST00000305409 CHADO15335 359 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 KRT4P19013 534 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 HOXD10P28358 340 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 GRK4P32298 578 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 STX2P32856 288 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 LIG3P49916 1009 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 WDR4P57081 412 aaKnown RBP11.76□□□□□ -0.53
SCG2-201ENST00000305409 YWHAHQ04917 246 aaPredicted RBP11.76□□□□□ -0.53
SCG2-201ENST00000305409 DDR2Q16832 855 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 ANKRD20A2Q5SQ80 823 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 ANKRD20A1Q5TYW2 823 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 ANKRD20A3Q5VUR7 823 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 CEP128Q6ZU80 1094 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 TTC9BQ8N6N2 239 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 NPWQ8N729 165 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
SCG2-201ENST00000305409 CENPTQ96BT3 561 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 RTP4Q96DX8 246 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 AGAP3Q96P47 875 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 COLEC11Q9BWP8 271 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 WDCPQ9H6R7 721 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 PLAC1Q9HBJ0 212 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 ALG13Q9NP73 1137 aaKnown RBP11.76□□□□□ -0.53
SCG2-201ENST00000305409 TBC1D13Q9NVG8 400 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 PTCH2Q9Y6C5 1203 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 NUP205Q92621 2012 aa11.76□□□□□ -0.53
SCG2-201ENST00000305409 WDR91A4D1P6 747 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 H3BRJ5 948 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 M0QZQ0 153 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 RNF103O00237 685 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 DGKIO75912 1065 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 FBXO21O94952 628 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 FOXN2P32314 431 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 MSH2P43246 934 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 TPI1P60174 286 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 FAM26DQ5JW98 314 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 NUGGCQ68CJ6 796 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 TRMT10BQ6PF06 316 aaKnown RBP11.75□□□□□ -0.53
SCG2-201ENST00000305409 DCLRE1AQ6PJP8 1040 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 FAM47EQ6ZV65 393 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 SLC24A5Q71RS6 500 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 ZNF534Q76KX8 674 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 BNIPLQ7Z465 357 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 SPATA2LQ8IUW3 424 aaPredicted RBP11.75□□□□□ -0.53
SCG2-201ENST00000305409 COLGALT1Q8NBJ5 622 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 DBF4BQ8NFT6 615 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 OLFM3Q96PB7 478 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 PKMYT1Q99640 499 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 NCAPGQ9BPX3 1015 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 HMX1Q9NP08 348 aaPredicted RBP11.75□□□□□ -0.53
SCG2-201ENST00000305409 DMAP1Q9NPF5 467 aaPredicted RBP11.75□□□□□ -0.53
SCG2-201ENST00000305409 RGS18Q9NS28 235 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 NKIRAS1Q9NYS0 192 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 IL1RAPL1Q9NZN1 696 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 SLC17A6Q9P2U8 582 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 PSMC3IPQ9P2W1 217 aaPredicted RBP11.75□□□□□ -0.53
SCG2-201ENST00000305409 ZC3H7BQ9UGR2 993 aaKnown RBP11.75□□□□□ -0.53
SCG2-201ENST00000305409 FBXW11Q9UKB1 542 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 GRID1Q9ULK0 1009 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.75□□□□□ -0.53
SCG2-201ENST00000305409 USP12O75317 370 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 F7P08709 466 aaPredicted RBP11.75□□□□□ -0.53
SCG2-201ENST00000305409 ZFXP17010 805 aaPredicted RBP11.75□□□□□ -0.53
SCG2-201ENST00000305409 PSMB4P28070 264 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 PHBP35232 272 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 NR2C2P49116 596 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 SLC5A3P53794 718 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 ATN1P54259 1190 aaPredicted RBP11.75□□□□□ -0.53
SCG2-201ENST00000305409 SESN2P58004 480 aaPredicted RBP11.75□□□□□ -0.53
SCG2-201ENST00000305409 TSPY1Q01534 308 aa11.75□□□□□ -0.53
SCG2-201ENST00000305409 SLC1A5Q15758 541 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms