RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ARID5AQ03989 594 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 RING1Q06587 406 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 ZNF33AQ06730 810 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 GEN1Q17RS7 908 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 DUOXA1Q1HG43 343 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 ARMCX6Q7L4S7 300 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 RRAGAQ7L523 313 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 FRMD1Q8N878 549 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 NDRG1Q92597 394 aaKnown RBP17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 FOXJ1Q92949 421 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 AZIN2Q96A70 460 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 INTS2Q9H0H0 1204 aaKnown RBP17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 KIAA1468Q9P260 1216 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 SFMBT1Q9UHJ3 866 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 RWDD2AQ9UIY3 292 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 CKAP5Q14008 2032 aa17.38■□□□□ 0.37
TRAPPC1-201ENST00000303731 PATE3B3GLJ2 98 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 RNF225M0QZC1 329 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 NDUFS2O75306 463 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 BRD2P25440 801 aaKnown RBP17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 HOXD9P28356 352 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 ACADSBP45954 432 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 SLC11A2P49281 568 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 RGS7P49802 495 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 NNTQ13423 1086 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 MPP7Q5T2T1 576 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 SYCP2LQ5T4T6 812 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 ARHGEF19Q8IW93 802 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 STK32AQ8WU08 396 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 KAT5Q92993 513 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 TMA16Q96EY4 203 aaKnown RBP17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 P2RY11Q96G91 374 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 DDX50Q9BQ39 737 aaKnown RBP17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 CIPCQ9C0C6 399 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 PRDM16Q9HAZ2 1276 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 SUSD2Q9UGT4 822 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 CYP8B1Q9UNU6 501 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 RAD54BQ9Y620 910 aa17.37■□□□□ 0.37
TRAPPC1-201ENST00000303731 CDX4O14627 284 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 IGLV3-27P01718 113 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 CSRP1P21291 193 aaKnown RBP17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 ITPKAP23677 461 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 OXTRP30559 389 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 IL12RB1P42701 662 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 RPL34P49207 117 aaKnown RBP17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 ZNF234Q14588 700 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 FUT11Q495W5 492 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 KIAA1324Q6UXG2 1013 aaKnown RBP17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 BEND5Q7L4P6 421 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 KREMEN1Q96MU8 473 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 SERPINB11Q96P15 392 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 ZSWIM1Q9BR11 485 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 FBRSQ9HAH7 460 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 TMEM74BQ9NUR3 256 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 ANGPTL2Q9UKU9 493 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 SLC6A14Q9UN76 642 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 NFE2L3Q9Y4A8 694 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 CACNA1EQ15878 2313 aa17.36■□□□□ 0.37
TRAPPC1-201ENST00000303731 ASCC3Q8N3C0 2202 aaKnown RBP17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 TYW5A2RUC4 315 aaKnown RBP17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 WASH3PC4AMC7 463 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 MSI1O43347 362 aaKnown RBP17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 SERPINF2P08697 491 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 NCAM1P13591 858 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 KRT5P13647 590 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 CEACAM1P13688 526 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 ENGP17813 658 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 PMLP29590 882 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 CD6P30203 668 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 GPD2P43304 727 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 NOVA1P51513 510 aaKnown RBP17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 ATXN3P54252 364 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 SHC2P98077 582 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 GFPT1Q06210 699 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 WDR45BQ5MNZ6 344 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 N4BP2L1Q5TBK1 243 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 SERPINA13PQ6UXR4 307 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 AHI1Q8N157 1196 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 ZNF419Q96HQ0 510 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 CNTNAP3BQ96NU0 1288 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 CNTNAP3Q9BZ76 1288 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 UBE2TQ9NPD8 197 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 USP36Q9P275 1121 aaKnown RBP17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 PLA2G4CQ9UP65 541 aa17.35■□□□□ 0.37
TRAPPC1-201ENST00000303731 GTPBP10A4D1E9 387 aaKnown RBP17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 CFIP05156 583 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 EPHX1P07099 455 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 SYPP08247 313 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 ACADMP11310 421 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 PRKCSHP14314 528 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 GNSP15586 552 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 HLA-FP30511 346 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 TBX4P57082 545 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 CACNA1BQ00975 2339 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 PSAPL1Q6NUJ1 521 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 TMPRSS6Q8IU80 811 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 MLKLQ8NB16 471 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 CADM4Q8NFZ8 388 aa17.34■□□□□ 0.37
TRAPPC1-201ENST00000303731 PRCCQ92733 491 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms