RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 CCDC110Q8TBZ0 833 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 SGSM3Q96HU1 749 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 CYTH2Q99418 400 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 RABEP2Q9H5N1 569 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 XAB2Q9HCS7 855 aaKnown RBP20.07■□□□□ 0.8
HOXC4-201ENST00000303406 EIF2B3Q9NR50 452 aaKnown RBP20.07■□□□□ 0.8
HOXC4-201ENST00000303406 TMLHEQ9NVH6 421 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 TMEM161AQ9NX61 479 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 POC1B-GALNT4F8VUJ3 575 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 NCAM2O15394 837 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 OPHN1O60890 802 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 BANF1O75531 89 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 OAZ2O95190 189 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 SSTR1P30872 391 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 PAN2Q504Q3 1202 aaKnown RBP20.07■□□□□ 0.8
HOXC4-201ENST00000303406 HP1BP3Q5SSJ5 553 aaPredicted RBP20.07■□□□□ 0.8
HOXC4-201ENST00000303406 LRRC8DQ7L1W4 858 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 YTHDF3Q7Z739 585 aaKnown RBP20.07■□□□□ 0.8
HOXC4-201ENST00000303406 LRRTM3Q86VH5 581 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 DCP1BQ8IZD4 617 aaKnown RBP20.07■□□□□ 0.8
HOXC4-201ENST00000303406 FBF1Q8TES7 1133 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 COLEC11Q9BWP8 271 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 DDIT4Q9NX09 232 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 NKIRAS1Q9NYS0 192 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 TBK1Q9UHD2 729 aa20.07■□□□□ 0.8
HOXC4-201ENST00000303406 FKTNO75072 461 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 DDHD2O94830 711 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 IGLV3-25P01717 112 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 ITGB1P05556 798 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 MLNP12872 115 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 VAV1P15498 845 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 STX2P32856 288 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 CDK7P50613 346 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 SARNPP82979 210 aaKnown RBP20.06■□□□□ 0.8
HOXC4-201ENST00000303406 BFSP2Q13515 415 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 BSPRYQ5W0U4 402 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 SPATA2LQ8IUW3 424 aaPredicted RBP20.06■□□□□ 0.8
HOXC4-201ENST00000303406 SRRM1Q8IYB3 904 aaKnown RBP20.06■□□□□ 0.8
HOXC4-201ENST00000303406 CKAP2Q8WWK9 683 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 FUBP3Q96I24 572 aaKnown RBP eCLIP20.06■□□□□ 0.8
HOXC4-201ENST00000303406 PRMT1Q99873 361 aaKnown RBP20.06■□□□□ 0.8
HOXC4-201ENST00000303406 NSRP1Q9H0G5 558 aaKnown RBP20.06■□□□□ 0.8
HOXC4-201ENST00000303406 ZCWPW1Q9H0M4 648 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 CHMP2BQ9UQN3 213 aa20.06■□□□□ 0.8
HOXC4-201ENST00000303406 SYNJ2BP-COX16A0A087WUM0 186 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 FAM47DPA6NHR8 397 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 KBTBD13C9JR72 458 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 TRDMT1O14717 391 aaKnown RBP20.05■□□□□ 0.8
HOXC4-201ENST00000303406 SYN3O14994 580 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 METTL18O95568 372 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 CREB1P16220 341 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 YY1P25490 414 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 GRK4P32298 578 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 HTR7P34969 479 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 APLP1P51693 650 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 EIF4EBP2Q13542 120 aaPredicted RBP20.05■□□□□ 0.8
HOXC4-201ENST00000303406 ANKRD20A2Q5SQ80 823 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 ANKRD20A1Q5TYW2 823 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 GKAP1Q5VSY0 366 aaPredicted RBP20.05■□□□□ 0.8
HOXC4-201ENST00000303406 ANKRD20A3Q5VUR7 823 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 CPLX4Q7Z7G2 160 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 CAND1Q86VP6 1230 aaKnown RBP20.05■□□□□ 0.8
HOXC4-201ENST00000303406 TAB3Q8N5C8 712 aaPredicted RBP20.05■□□□□ 0.8
HOXC4-201ENST00000303406 HASPINQ8TF76 798 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 EPAS1Q99814 870 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 OSBPL2Q9H1P3 480 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 TRABDQ9H4I3 376 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 KCNK9Q9NPC2 374 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 TBC1D13Q9NVG8 400 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.05■□□□□ 0.8
HOXC4-201ENST00000303406 COX16Q9P0S2 106 aa20.05■□□□□ 0.8
HOXC4-201ENST00000303406 RRP15Q9Y3B9 282 aaKnown RBP20.05■□□□□ 0.8
HOXC4-201ENST00000303406 TNFRSF10BO14763 440 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 CREB3O43889 395 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 MAP3K6O95382 1288 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 APRTP07741 180 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 MSH2P43246 934 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 RABGGTBP53611 331 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 TPI1P60174 286 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 NFE2Q16621 373 aaPredicted RBP20.04■□□□□ 0.8
HOXC4-201ENST00000303406 ZNF280BQ86YH2 543 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 CNPY4Q8N129 248 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 DYDC1Q8WWB3 177 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 ALKBH8Q96BT7 664 aaKnown RBP20.04■□□□□ 0.8
HOXC4-201ENST00000303406 SMC6Q96SB8 1091 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 TMEM209Q96SK2 561 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 PAFAH2Q99487 392 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 RHOBTB2Q9BYZ6 727 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 WDCPQ9H6R7 721 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 ABCC13Q9NSE7 274 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 MFHAS1Q9Y4C4 1052 aa20.04■□□□□ 0.8
HOXC4-201ENST00000303406 MTSS1O43312 755 aa20.03■□□□□ 0.8
HOXC4-201ENST00000303406 ERCC2P18074 760 aa20.03■□□□□ 0.8
HOXC4-201ENST00000303406 KRT15P19012 456 aa20.03■□□□□ 0.8
HOXC4-201ENST00000303406 PKN2Q16513 984 aaKnown RBP20.03■□□□□ 0.8
HOXC4-201ENST00000303406 BRMS1LQ5PSV4 323 aa20.03■□□□□ 0.8
HOXC4-201ENST00000303406 C6orf89Q6UWU4 347 aa20.03■□□□□ 0.8
HOXC4-201ENST00000303406 CAPN12Q6ZSI9 719 aa20.03■□□□□ 0.8
HOXC4-201ENST00000303406 ZNF534Q76KX8 674 aa20.03■□□□□ 0.8
HOXC4-201ENST00000303406 TAC4Q86UU9 113 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms