RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 INPP4BO15327 924 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 MSH4O15457 936 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 TCEA3O75764 348 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 MAP3K6O95382 1288 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 CPA3P15088 417 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 ACADLP28330 430 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 SKP1P63208 163 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 ZNF846Q147U1 533 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 R3HDM1Q15032 1099 aaKnown RBP10.63□□□□□ -0.71
CLIP1-201ENST00000302528 RASA2Q15283 850 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 CLVS1Q8IUQ0 354 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-201ENST00000302528 FAM129BQ96TA1 746 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 NUAK2Q9H093 628 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 CAB39LQ9H9S4 337 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 MRPS7Q9Y2R9 242 aaKnown RBP10.63□□□□□ -0.71
CLIP1-201ENST00000302528 ARAP3Q8WWN8 1544 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 ATP9AO75110 1047 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 F9P00740 461 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 LDLRP01130 860 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 RAB2AP61019 212 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 SNAPC2Q13487 334 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 ITIH4Q14624 930 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 GNASQ5JWF2 1037 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 STRIP1Q5VSL9 837 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 HERC6Q8IVU3 1022 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 CCDC185Q8N715 623 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 AGPAT5Q9NUQ2 364 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 TRIM10Q9UDY6 481 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 VTI1BQ9UEU0 232 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 PALLDQ8WX93 1383 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 RRN3P2A6NIE6 340 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 CBX4O00257 560 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 TFRCP02786 760 aaKnown RBP10.63□□□□□ -0.71
CLIP1-201ENST00000302528 ANXA6P08133 673 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 NR3C2P08235 984 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 ITGB6P18564 788 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 CPT1AP50416 773 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 NEK5Q6P3R8 708 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 PTAR1Q7Z6K3 402 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-201ENST00000302528 STK32CQ86UX6 486 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 CCDC33Q8N5R6 958 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 APOL2Q9BQE5 337 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 UGT2B28Q9BY64 529 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 DPP3Q9NY33 737 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 KLK14Q9P0G3 267 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-201ENST00000302528 LRRC7Q96NW7 1537 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 ABCC3O15438 1527 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 LYNP07948 512 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 YY1P25490 414 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 GSTM5P46439 218 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 ZC2HC1CQ53FD0 456 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-201ENST00000302528 CYP20A1Q6UW02 462 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 DHFR2Q86XF0 187 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 NEK7Q8TDX7 302 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 SKA1Q96BD8 255 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 REPS1Q96D71 796 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 CATSPER2Q96P56 530 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 NCOA3Q9Y6Q9 1424 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 METP08581 1390 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 ADCY6O43306 1168 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 HBP1O60381 514 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 TRIM3O75382 744 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-201ENST00000302528 SEC22BO75396 215 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 MB21D2Q8IYB1 491 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-201ENST00000302528 DEFB107AQ8IZN7 70 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 FNDC5Q8NAU1 212 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 KYQ8NBH2 561 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 NEDD1Q8NHV4 660 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 MAML3Q96JK9 1138 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 NAT9Q9BTE0 207 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 A1CFQ9NQ94 594 aaKnown RBP10.62□□□□□ -0.71
CLIP1-201ENST00000302528 ENTPD4Q9Y227 616 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 IGSF9BQ9UPX0 1349 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 CEP152O94986 1710 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 STX16-NPEPL1H3BU86 382 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 STX16O14662 325 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 AREL1O15033 823 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 S100A6P06703 90 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 CNTFP26441 200 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 EFEMP1Q12805 493 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 EPS8Q12929 822 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 TIMM50Q3ZCQ8 353 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 RASGRP2Q7LDG7 609 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 SLFN11Q7Z7L1 901 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-201ENST00000302528 RNF180Q86T96 592 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 EPS8L3Q8TE67 593 aaKnown RBP10.62□□□□□ -0.71
CLIP1-201ENST00000302528 GLT1D1Q96MS3 346 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 RNF145Q96MT1 663 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 NT5MQ9NPB1 228 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 A0A088AWK7 358 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 CCDC154A6NI56 674 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 RPS6KA4O75676 772 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 URODP06132 367 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 ZNF10P21506 573 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-201ENST00000302528 HSD17B3P37058 310 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 MAPK10P53779 464 aa10.62□□□□□ -0.71
CLIP1-201ENST00000302528 NOL9Q5SY16 702 aaKnown RBP10.62□□□□□ -0.71
CLIP1-201ENST00000302528 PRR5LQ6MZQ0 368 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms