RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 FNBP1LQ5T0N5 605 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 C6orf118Q5T5N4 469 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 NUP93Q8N1F7 819 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 NETO2Q8NC67 525 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 ROPN1BQ9BZX4 212 aaPredicted RBP23.05■■□□□ 1.28
SMAD1-201ENST00000302085 ROPN1Q9HAT0 212 aaPredicted RBP23.05■■□□□ 1.28
SMAD1-201ENST00000302085 XPO7Q9UIA9 1087 aaKnown RBP23.05■■□□□ 1.28
SMAD1-201ENST00000302085 A0A1W2PQH9 124 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 VNN2O95498 520 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 SLCO1A2P46721 670 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 PAFAH1B3Q15102 231 aaKnown RBP23.05■■□□□ 1.28
SMAD1-201ENST00000302085 CNKSR3Q6P9H4 555 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 CENPUQ71F23 418 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 SCML2Q9UQR0 700 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 MICAL3Q7RTP6 2002 aa23.04■■□□□ 1.28
SMAD1-201ENST00000302085 SMAPO00193 183 aa23.04■■□□□ 1.28
SMAD1-201ENST00000302085 ACTN2P35609 894 aa23.04■■□□□ 1.28
SMAD1-201ENST00000302085 ATP1A2P50993 1020 aa23.04■■□□□ 1.28
SMAD1-201ENST00000302085 PDIA2Q13087 525 aaKnown RBP23.04■■□□□ 1.28
SMAD1-201ENST00000302085 KCNJ11Q14654 390 aa23.04■■□□□ 1.28
SMAD1-201ENST00000302085 MSS51Q4VC12 460 aa23.04■■□□□ 1.28
SMAD1-201ENST00000302085 CROCCP2Q86T23 111 aa23.04■■□□□ 1.28
SMAD1-201ENST00000302085 CCDC110Q8TBZ0 833 aa23.04■■□□□ 1.28
SMAD1-201ENST00000302085 TTPALQ9BTX7 342 aa23.04■■□□□ 1.28
SMAD1-201ENST00000302085 OSER1Q9NX31 292 aa23.04■■□□□ 1.28
SMAD1-201ENST00000302085 SLC27A5Q9Y2P5 690 aa23.04■■□□□ 1.28
SMAD1-201ENST00000302085 BANF1O75531 89 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 GCATO75600 419 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 ERCC2P18074 760 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 ARL4CP56559 192 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 MAGOHP61326 146 aaKnown RBP23.03■■□□□ 1.28
SMAD1-201ENST00000302085 USP46P62068 366 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 GPR17Q13304 367 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 AUHQ13825 339 aaKnown RBP23.03■■□□□ 1.28
SMAD1-201ENST00000302085 HIF1AQ16665 826 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 LONRF1Q17RB8 773 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 RNF19BQ6ZMZ0 732 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 BZW1Q7L1Q6 419 aaKnown RBP23.03■■□□□ 1.28
SMAD1-201ENST00000302085 TFB1MQ8WVM0 346 aaKnown RBP23.03■■□□□ 1.28
SMAD1-201ENST00000302085 CASP10Q92851 521 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 RNF34Q969K3 372 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 LGMNQ99538 433 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 CWH43Q9H720 699 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 RAB6BQ9NRW1 208 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 IL37Q9NZH6 218 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 SFMBT1Q9UHJ3 866 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 HACD1B0YJ81 288 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 H7C4K7 107 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 SOAT2O75908 522 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 EFEMP2O95967 443 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 VAV1P15498 845 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 IFI35P80217 286 aaPredicted RBP23.03■■□□□ 1.28
SMAD1-201ENST00000302085 CCDC13Q8IYE1 715 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 ZBED8Q8IZ13 594 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 GPR152Q8TDT2 470 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 CRISPLD1Q9H336 500 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 SMOC2Q9H3U7 446 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 OR12D3Q9UGF7 316 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 NR2E3Q9Y5X4 410 aa23.03■■□□□ 1.28
SMAD1-201ENST00000302085 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.03■■□□□ 1.28
SMAD1-201ENST00000302085 MTMR11A4FU01 709 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 C5orf60A6NFR6 353 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 RGS16O15492 202 aaPredicted RBP23.02■■□□□ 1.28
SMAD1-201ENST00000302085 IRAK2O43187 625 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 ABHD2P08910 425 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 CLTBP09497 229 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 CPB1P15086 417 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 HPDP32754 393 aaPredicted RBP23.02■■□□□ 1.28
SMAD1-201ENST00000302085 TPI1P60174 286 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 FBXO46Q6PJ61 603 aaPredicted RBP23.02■■□□□ 1.28
SMAD1-201ENST00000302085 PRSS55Q6UWB4 352 aaPredicted RBP23.02■■□□□ 1.28
SMAD1-201ENST00000302085 ANKS3Q6ZW76 656 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 MON1AQ86VX9 555 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 TP53INP2Q8IXH6 220 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 FBXO44Q9H4M3 255 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 ARHGEF38Q9NXL2 777 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 NUDT5Q9UKK9 219 aa23.02■■□□□ 1.28
SMAD1-201ENST00000302085 ZMYND8Q9ULU4 1186 aaPredicted RBP23.02■■□□□ 1.28
SMAD1-201ENST00000302085 E7ESA3 106 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 CHADO15335 359 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 TCEA3O75764 348 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 GJA8P48165 433 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 LRRC26Q2I0M4 334 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 TNFAIP8L3Q5GJ75 292 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 SYCP2LQ5T4T6 812 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 ARMC5Q96C12 935 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 TTC25Q96NG3 672 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 PHACTR1Q9C0D0 580 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 OSBPL2Q9H1P3 480 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 ETNK1Q9HBU6 452 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 METTL18O95568 372 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 ALDH7A1P49419 539 aaKnown RBP23.01■■□□□ 1.27
SMAD1-201ENST00000302085 PRKD1Q15139 912 aaPredicted RBP23.01■■□□□ 1.27
SMAD1-201ENST00000302085 FAXCQ5TGI0 409 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 MFSD5Q6N075 450 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 ANKMY2Q8IV38 441 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 HTR3CQ8WXA8 447 aa23.01■■□□□ 1.27
SMAD1-201ENST00000302085 PAWRQ96IZ0 340 aaKnown RBP23.01■■□□□ 1.27
SMAD1-201ENST00000302085 WDR83Q9BRX9 315 aaKnown RBP23.01■■□□□ 1.27
SMAD1-201ENST00000302085 VN1R3Q9BXE9 311 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms