RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 H7C0C1 242 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 KCNN4O15554 427 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 CST3P01034 146 aaPredicted RBP11.2□□□□□ -0.62
ZNF558-201ENST00000301475 NPR1P16066 1061 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 NELFEP18615 380 aaKnown RBP11.2□□□□□ -0.62
ZNF558-201ENST00000301475 EIF4BP23588 611 aaKnown RBP11.2□□□□□ -0.62
ZNF558-201ENST00000301475 ALDH1B1P30837 517 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 ATP5OP48047 213 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 ENTPD1P49961 510 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 NUDT2P50583 147 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 CBLBQ13191 982 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 PDE1CQ14123 709 aaPredicted RBP11.2□□□□□ -0.62
ZNF558-201ENST00000301475 FLOT2Q14254 428 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 CYTH1Q15438 398 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 PPM1LQ5SGD2 360 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 DENND1BQ6P3S1 775 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 POTEHQ6S545 545 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 Q6ZNX1 250 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 NIPA1Q7RTP0 329 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 ERI1Q8IV48 349 aaKnown RBP11.2□□□□□ -0.62
ZNF558-201ENST00000301475 GSDMBQ8TAX9 411 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 LENG8Q96PV6 779 aaPredicted RBP11.2□□□□□ -0.62
ZNF558-201ENST00000301475 RTKNQ9BST9 563 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 IMPG2Q9BZV3 1241 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 SDCBP2Q9H190 292 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 RNPEPQ9H4A4 650 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 RNF11Q9Y3C5 154 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 WDR64B1ANS9 1081 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 TPP1O14773 563 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 TBC1D12O60347 775 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 PDGFRBP09619 1106 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 ZNF23P17027 643 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 CDH5P33151 784 aaPredicted RBP11.2□□□□□ -0.62
ZNF558-201ENST00000301475 MS4A2Q01362 244 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 SLC9B1Q4ZJI4 515 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 SLC44A4Q53GD3 710 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 CHERPQ8IWX8 916 aaKnown RBP11.2□□□□□ -0.62
ZNF558-201ENST00000301475 RNF148Q8N7C7 305 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 ADCY4Q8NFM4 1077 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 MAPK15Q8TD08 544 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 DEPDC1BQ8WUY9 529 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 SIGLEC10Q96LC7 697 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 CGRRF1Q99675 332 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 PCDH18Q9HCL0 1135 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 TBCCD1Q9NVR7 557 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 PAK5Q9P286 719 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 PADI4Q9UM07 663 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 TMX2Q9Y320 296 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 AFG3L2Q9Y4W6 797 aa11.2□□□□□ -0.62
ZNF558-201ENST00000301475 MYO18AQ92614 2054 aaKnown RBP11.2□□□□□ -0.62
ZNF558-201ENST00000301475 AIM2O14862 343 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 EDN1P05305 212 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 EIF2AK2P19525 551 aaKnown RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 EPHA3P29320 983 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 GRIA1P42261 906 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 CDK9P50750 372 aaKnown RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 CLCN2P51788 898 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 PKNOX1P55347 436 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 PHEXP78562 749 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 MTA1Q13330 715 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 SMAD1Q15797 465 aaKnown RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 ANKDD1AQ495B1 522 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 ELMSAN1Q6PJG2 1045 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 TIFABQ6ZNK6 161 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 PATL1Q86TB9 770 aaKnown RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 FLAD1Q8NFF5 587 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 PPP4R1Q8TF05 950 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 SLC35B4Q969S0 331 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 MASTLQ96GX5 879 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 CISHQ9NSE2 258 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 SERPINA10Q9UK55 444 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 FAF1Q9UNN5 650 aaPredicted RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 CROCCQ5TZA2 2017 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 SCN9AQ15858 1988 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 PRSS51A0A1B0GVH4 220 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 SH3PXD2BA1X283 911 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 XPO1O14980 1071 aaKnown RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 TFPTP0C1Z6 253 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 RBL1P28749 1068 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 SERPINB5P36952 375 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 MAGEA3P43357 314 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 ZNF423Q2M1K9 1284 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 SH3PXD2AQ5TCZ1 1133 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 SCARA5Q6ZMJ2 495 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 LPCAT2Q7L5N7 544 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 SP8Q8IXZ3 490 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 TSPAN14Q8NG11 270 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 KLHL32Q96NJ5 620 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 OR52B2Q96RD2 323 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 CCT7Q99832 543 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 YIPF2Q9BWQ6 316 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 THEGQ9P2T0 379 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 PAIP2BQ9ULR5 123 aaKnown RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 USP18Q9UMW8 372 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 E2F8A0AVK6 867 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 C7orf72A4D263 438 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 ZNF189O75820 626 aaPredicted RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 ASS1P00966 412 aaKnown RBP11.19□□□□□ -0.62
ZNF558-201ENST00000301475 PRDX6P30041 224 aa11.19□□□□□ -0.62
ZNF558-201ENST00000301475 DPP6P42658 865 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms