RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 C1orf220Q5T0J3 134 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 SCARA3Q6AZY7 606 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 RCN3Q96D15 328 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 RPL10LQ96L21 214 aaKnown RBP14.85□□□□□ -0.03
CDT1-201ENST00000301019 EIF2AQ9BY44 585 aaKnown RBP14.85□□□□□ -0.03
CDT1-201ENST00000301019 TBC1D22BQ9NU19 505 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 TBCCD1Q9NVR7 557 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 ATRNL1Q5VV63 1379 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 A0A0B4J269 797 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 POLRMTO00411 1230 aaKnown RBP14.84□□□□□ -0.03
CDT1-201ENST00000301019 CNOT3O75175 753 aaKnown RBP14.84□□□□□ -0.03
CDT1-201ENST00000301019 APOFQ13790 326 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 ADGRE1Q14246 886 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 DSG4Q86SJ6 1040 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 SCAIQ8N9R8 606 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 PIWIL2Q8TC59 973 aaKnown RBP14.84□□□□□ -0.03
CDT1-201ENST00000301019 NOL6Q9H6R4 1146 aaKnown RBP14.84□□□□□ -0.03
CDT1-201ENST00000301019 SSX2IPQ9Y2D8 614 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 MYRFQ9Y2G1 1151 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 GIT1Q9Y2X7 761 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 TIMM22Q9Y584 194 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 ZNF804BA4D1E1 1349 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 BTBD19C9JJ37 291 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 B4GAT1O43505 415 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 MAN1A2O60476 641 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 APRTP07741 180 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 DHRS4L1P0CG22 281 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 NCAM1P13591 858 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 ARRB2P32121 409 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 IDH3AP50213 366 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 SLC10A2Q12908 348 aaPredicted RBP14.84□□□□□ -0.03
CDT1-201ENST00000301019 PLCL1Q15111 1095 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 RGS21Q2M5E4 152 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 SLC9B1Q4ZJI4 515 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 DPH6Q7L8W6 267 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 PIWIL3Q7Z3Z3 882 aaKnown RBP14.84□□□□□ -0.03
CDT1-201ENST00000301019 CROCCP3Q8IVE0 287 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 NLGN1Q8N2Q7 840 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 MAELQ96JY0 434 aaKnown RBP14.84□□□□□ -0.03
CDT1-201ENST00000301019 SLITRK1Q96PX8 696 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 NPAS2Q99743 824 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 SLC4A5Q9BY07 1137 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 POLR1BQ9H9Y6 1135 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 CXorf21Q9HAI6 301 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 KMT5AQ9NQR1 393 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 SMYD2Q9NRG4 433 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 CNTN3Q9P232 1028 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 HESX1Q9UBX0 185 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 CCPG1Q9ULG6 757 aa14.84□□□□□ -0.03
CDT1-201ENST00000301019 C6orf229H3BNL8 230 aa14.83□□□□□ -0.03
CDT1-201ENST00000301019 CSH1P0DML2 217 aa14.83□□□□□ -0.03
CDT1-201ENST00000301019 CSH2P0DML3 217 aa14.83□□□□□ -0.03
CDT1-201ENST00000301019 MAP4P27816 1152 aaKnown RBP14.83□□□□□ -0.03
CDT1-201ENST00000301019 PPARGP37231 505 aaPredicted RBP14.83□□□□□ -0.03
CDT1-201ENST00000301019 QARSP47897 775 aaKnown RBP14.83□□□□□ -0.03
CDT1-201ENST00000301019 TIGD2Q4W5G0 525 aa14.83□□□□□ -0.03
CDT1-201ENST00000301019 C10orf107Q8IVU9 208 aa14.83□□□□□ -0.03
CDT1-201ENST00000301019 BPIFB6Q8NFQ5 453 aa14.83□□□□□ -0.03
CDT1-201ENST00000301019 NEDD1Q8NHV4 660 aa14.83□□□□□ -0.03
CDT1-201ENST00000301019 CYGBQ8WWM9 190 aa14.83□□□□□ -0.03
CDT1-201ENST00000301019 OR52B2Q96RD2 323 aa14.83□□□□□ -0.03
CDT1-201ENST00000301019 MRPL46Q9H2W6 279 aaKnown RBP14.83□□□□□ -0.03
CDT1-201ENST00000301019 ZNF696Q9H7X3 374 aa14.83□□□□□ -0.03
CDT1-201ENST00000301019 V9GYQ6 96 aa14.83□□□□□ -0.03
CDT1-201ENST00000301019 ARHGEF35A5YM69 484 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 GRIN3BO60391 1043 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 RAD17O75943 681 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 H6PDO95479 791 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 MT-CO1P00395 513 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 SLC18A1P54219 525 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 GTF2IP78347 998 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 CIAPIN1Q6FI81 312 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 TTC33Q6PID6 262 aaPredicted RBP14.83□□□□□ -0.04
CDT1-201ENST00000301019 PPIL6Q8IXY8 311 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 KIAA2013Q8IYS2 634 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 ALKBH8Q96BT7 664 aaKnown RBP14.83□□□□□ -0.04
CDT1-201ENST00000301019 FAF2Q96CS3 445 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 RAB6BQ9NRW1 208 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 KIAA1522Q9P206 1035 aaPredicted RBP14.83□□□□□ -0.04
CDT1-201ENST00000301019 CFAP99D6REC4 459 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 MT-ND1P03886 318 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 ZNF23P17027 643 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 HDCP19113 662 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 MAMLD1Q13495 774 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 HYIQ5T013 277 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 N4BP2L1Q5TBK1 243 aaPredicted RBP14.83□□□□□ -0.04
CDT1-201ENST00000301019 CES3Q6UWW8 571 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 SPOCD1Q6ZMY3 1216 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 EMC1Q8N766 993 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 STN1Q9H668 368 aaKnown RBP14.83□□□□□ -0.04
CDT1-201ENST00000301019 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.83□□□□□ -0.04
CDT1-201ENST00000301019 DNAJC28Q9NX36 388 aa14.83□□□□□ -0.04
CDT1-201ENST00000301019 ZBTB5O15062 677 aa14.82□□□□□ -0.04
CDT1-201ENST00000301019 FPGSQ05932 587 aa14.82□□□□□ -0.04
CDT1-201ENST00000301019 PMS2P3Q13401 168 aa14.82□□□□□ -0.04
CDT1-201ENST00000301019 CEACAM7Q14002 265 aa14.82□□□□□ -0.04
CDT1-201ENST00000301019 C1orf186Q6ZWK4 172 aa14.82□□□□□ -0.04
CDT1-201ENST00000301019 CHSY1Q86X52 802 aa14.82□□□□□ -0.04
CDT1-201ENST00000301019 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.82□□□□□ -0.04
CDT1-201ENST00000301019 JADE3Q92613 823 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms