RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TKTP29401 623 aaKnown RBP13.31□□□□□ -0.28
HIF3A-204ENST00000300862 MAGEA3P43357 314 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 MAGEA6P43360 314 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 CMPK2Q5EBM0 449 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 SLC27A1Q6PCB7 646 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 NT5DC4Q86YG4 428 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 NUDCD3Q8IVD9 361 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 PDCD7Q8N8D1 485 aaKnown RBP13.31□□□□□ -0.28
HIF3A-204ENST00000300862 BTBD10Q9BSF8 475 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 C11orf84Q9BUA3 381 aaPredicted RBP13.31□□□□□ -0.28
HIF3A-204ENST00000300862 SEPT10Q9P0V9 454 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 ZNF180Q9UJW8 692 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 E2F8A0AVK6 867 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 I3L4J1 428 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 GSC2O15499 205 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 SETSIPP0DME0 302 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 PTDSS1P48651 473 aaKnown RBP13.31□□□□□ -0.28
HIF3A-204ENST00000300862 BST2Q10589 180 aaKnown RBP13.31□□□□□ -0.28
HIF3A-204ENST00000300862 OLIG2Q13516 323 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 DCAF4L1Q3SXM0 396 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 LGSNQ5TDP6 509 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 CES3Q6UWW8 571 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 SLC26A9Q7LBE3 791 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 DPP9Q86TI2 863 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 ANKRD52Q8NB46 1076 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 MCUQ8NE86 351 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 OR6J1Q8NGC5 347 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 FBXO27Q8NI29 283 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 TAS2R1Q9NYW7 299 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 CACNG4Q9UBN1 327 aa13.31□□□□□ -0.28
HIF3A-204ENST00000300862 FAM159BA6NKW6 160 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 PDHXO00330 501 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 MFSD11O43934 449 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 KRT38O76015 456 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 TGDSO95455 350 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 ESRRAP11474 423 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 ACAT1P24752 427 aaKnown RBP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 PTPN9P43378 593 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 AP1B1Q10567 949 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 SNAPC2Q13487 334 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 KPNB1Q14974 876 aaKnown RBP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 DCAF6Q58WW2 860 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 FBXO47Q5MNV8 452 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 PRAMEF19Q5SWL8 479 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 C4orf50Q6ZRC1 276 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 ADGRF2Q8IZF7 708 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 DEFB106AQ8N104 65 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 SHCBP1Q8NEM2 672 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 TMEM40Q8WWA1 233 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 HTR3CQ8WXA8 447 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 CENPIQ92674 756 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 USP6NLQ92738 828 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 LENG1Q96BZ8 264 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 QKIQ96PU8 341 aaKnown RBP eCLIP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 SYT15Q9BQS2 421 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 FRMD8Q9BZ67 464 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 GCOM2Q9BZD3 368 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 TLE6Q9H808 572 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 PPARGC1AQ9UBK2 798 aaKnown RBP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 COL1A2P08123 1366 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 KPNA7A9QM74 516 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 AHCYL1O43865 530 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 CREB3O43889 395 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 GPR32O75388 356 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 ENO1P06733 434 aaKnown RBP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 NDUFV1P49821 464 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 BCAT1P54687 386 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 SOX4Q06945 474 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 ADIGQ0VDE8 80 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 RCN2Q14257 317 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 ARHGAP17Q68EM7 881 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 ZNF410Q86VK4 478 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 TREML1Q86YW5 311 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 TFB1MQ8WVM0 346 aaKnown RBP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 SNX25Q9H3E2 840 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 PLEKHA5Q9HAU0 1116 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.3□□□□□ -0.28
HIF3A-204ENST00000300862 PCDHA11Q9Y5I1 949 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 PSAT1Q9Y617 370 aa13.3□□□□□ -0.28
HIF3A-204ENST00000300862 SMIM28A0A1B0GU29 152 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 BEST1O76090 585 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 MGAT1P26572 445 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 SULT1E1P49888 294 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 AQP5P55064 265 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 MRPS35P82673 323 aaKnown RBP13.29□□□□□ -0.28
HIF3A-204ENST00000300862 NME3Q13232 169 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 HIC1Q14526 733 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 SPDYAQ5MJ70 313 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 AP1ARQ63HQ0 302 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 SMYD5Q6GMV2 418 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 LRRC52Q8N7C0 313 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 COLGALT1Q8NBJ5 622 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 CCNYQ8ND76 341 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 STKLD1Q8NE28 680 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 WDR60Q8WVS4 1066 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 MCUR1Q96AQ8 359 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 SLC10A4Q96EP9 437 aa13.29□□□□□ -0.28
HIF3A-204ENST00000300862 PIN4Q9Y237 131 aaKnown RBP13.29□□□□□ -0.28
HIF3A-204ENST00000300862 DYNC1LI2O43237 492 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms