RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 LRRC40Q9H9A6 602 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 TCF7L2Q9NQB0 619 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 CACNG4Q9UBN1 327 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 TAGLN3Q9UI15 199 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 SAC3D1A6NKF1 404 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 TPP1O14773 563 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 BAIAP3O94812 1187 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 IL10P22301 178 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 EIF4BP23588 611 aaKnown RBP15.2■□□□□ 0.02
CDH23-202ENST00000299366 JAM2P57087 298 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 PDK2Q15119 407 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 LRRC74BQ6ZQY2 392 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 SNX19Q92543 992 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 APOBEC3GQ9HC16 384 aaKnown RBP15.2■□□□□ 0.02
CDH23-202ENST00000299366 CD274Q9NZQ7 290 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.2■□□□□ 0.02
CDH23-202ENST00000299366 ACOT9Q9Y305 439 aa15.2■□□□□ 0.02
CDH23-202ENST00000299366 HNRNPCL1O60812 293 aaKnown RBP15.19■□□□□ 0.02
CDH23-202ENST00000299366 SH3BGRLO75368 114 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 ATXN1P54253 815 aaKnown RBP15.19■□□□□ 0.02
CDH23-202ENST00000299366 DRG2P55039 364 aaKnown RBP15.19■□□□□ 0.02
CDH23-202ENST00000299366 GRIK4Q16099 956 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 UGP2Q16851 508 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 ZNF470Q6ECI4 717 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 RNF168Q8IYW5 571 aaPredicted RBP15.19■□□□□ 0.02
CDH23-202ENST00000299366 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.19■□□□□ 0.02
CDH23-202ENST00000299366 TRPM4Q8TD43 1214 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 ZNF317Q96PQ6 595 aaPredicted RBP15.19■□□□□ 0.02
CDH23-202ENST00000299366 ULBP1Q9BZM6 244 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 CASZ1Q86V15 1759 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 GOLGB1Q14789 3259 aaKnown RBP15.19■□□□□ 0.02
CDH23-202ENST00000299366 PAPSS1O43252 624 aaPredicted RBP15.19■□□□□ 0.02
CDH23-202ENST00000299366 STMN1P16949 149 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 HMOX2P30519 316 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 TGFB2P61812 414 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 MGAT5Q09328 741 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 ZNF268Q14587 947 aaPredicted RBP15.19■□□□□ 0.02
CDH23-202ENST00000299366 PLEKHO2Q8TD55 490 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 VCPIP1Q96JH7 1222 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 ZNF570Q96NI8 536 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 NMUR2Q9GZQ4 415 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 GPAMQ9HCL2 828 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 ETNK2Q9NVF9 386 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 ARL8BQ9NVJ2 186 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 NR5A2O00482 541 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 MMP8P22894 467 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 PCSK1P29120 753 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 ACADSBP45954 432 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 ZNF157P51786 506 aaPredicted RBP15.19■□□□□ 0.02
CDH23-202ENST00000299366 GDF10P55107 478 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 SPIRE1Q08AE8 756 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 TREML2Q5T2D2 321 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 OTUD3Q5T2D3 398 aaPredicted RBP15.19■□□□□ 0.02
CDH23-202ENST00000299366 ZDHHC24Q6UX98 284 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 ZPBP2Q6X784 338 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 UNC5AQ6ZN44 842 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 ERO1BQ86YB8 467 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 SEPHS2Q99611 448 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 CITO14578 2027 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 CNTNAP2Q9UHC6 1331 aa15.19■□□□□ 0.02
CDH23-202ENST00000299366 MYO1GB0I1T2 1018 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 TM9SF1O15321 606 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 RHOBTB1O94844 696 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 ATP4AP20648 1035 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 BDNFP23560 247 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 ADORA2AP29274 412 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 PPP1R26Q5T8A7 1209 aaPredicted RBP15.18■□□□□ 0.02
CDH23-202ENST00000299366 C15orf52Q6ZUT6 534 aaKnown RBP15.18■□□□□ 0.02
CDH23-202ENST00000299366 C18orf25Q96B23 403 aaPredicted RBP15.18■□□□□ 0.02
CDH23-202ENST00000299366 CENPTQ96BT3 561 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 VPS50Q96JG6 964 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 DCUN1D5Q9BTE7 237 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 XPNPEP1Q9NQW7 623 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 PCDHA2Q9Y5H9 948 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 TMEM191CA6NGB0 347 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 SIGLEC16A6NMB1 481 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 AGRPO00253 132 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 LRCH4O75427 683 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 ASS1P00966 412 aaKnown RBP15.18■□□□□ 0.02
CDH23-202ENST00000299366 EPHA3P29320 983 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 CCR1P32246 355 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 PTK2BQ14289 1009 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 FBXO48Q5FWF7 155 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 FNBP1LQ5T0N5 605 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 VWA5B1Q5TIE3 1220 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 SDHAF4Q5VUM1 108 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 SAMD3Q8N6K7 520 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 MUC3BQ9H195 1237 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 VPS33BQ9H267 617 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 COPS7BQ9H9Q2 264 aaPredicted RBP15.18■□□□□ 0.02
CDH23-202ENST00000299366 SOX13Q9UN79 622 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 MROH7Q68CQ1 1323 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 PRR5-ARHGAP8B1AHC4 643 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 PIGNO95427 931 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 ARHGAP8P85298 464 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 CDK16Q00536 496 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 PDK4Q16654 411 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 WSCD1Q658N2 575 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 SCIMPQ6UWF3 145 aa15.18■□□□□ 0.02
CDH23-202ENST00000299366 CRELD2Q6UXH1 353 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms