RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 FAM72DQ6L9T8 149 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 FAM72BQ86X60 149 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 RFX6Q8HWS3 928 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 HS6ST3Q8IZP7 471 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 ELMOD1Q8N336 334 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 C1orf54Q8WWF1 131 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 MAGOHBQ96A72 148 aaKnown RBP25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 MAK16Q9BXY0 300 aaKnown RBP25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 DCLK3Q9C098 648 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 RNF38Q9H0F5 515 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 SLITRK6Q9H5Y7 841 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 RASAL2Q9UJF2 1139 aa25.52■■□□□ 1.68
GTF2A1-201ENST00000298173 TRANK1O15050 2925 aa25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 CCL16O15467 120 aa25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 HNRNPA1P09651 372 aaKnown RBP eCLIP25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 GOT1P17174 413 aa25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 EPHA5P54756 1037 aa25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 DUSP6Q16828 381 aa25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 ARTNQ5T4W7 220 aa25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 TTC27Q6P3X3 843 aa25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 RBM23Q86U06 439 aaKnown RBP25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 MIB1Q86YT6 1006 aa25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 OR12D3Q9UGF7 316 aa25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 PCYOX1Q9UHG3 505 aa25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 HBS1LQ9Y450 684 aaKnown RBP25.51■■□□□ 1.67
GTF2A1-201ENST00000298173 MYO9BQ13459 2157 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 SLC12A8A0AV02 714 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 C2orf78A6NCI8 922 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 PAGE1O75459 146 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 ARL4AP40617 200 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 ZNF135P52742 658 aaPredicted RBP25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 KCNC3Q14003 757 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 DRICH1Q6PGQ1 229 aaPredicted RBP25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 C1orf74Q96LT6 269 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 EPC1Q9H2F5 836 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 TLE6Q9H808 572 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 ANKZF1Q9H8Y5 726 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 PRDM16Q9HAZ2 1276 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 DPP7Q9UHL4 492 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 CDH23Q9H251 3354 aa25.5■■□□□ 1.67
GTF2A1-201ENST00000298173 PAPLNO95428 1278 aa25.49■■□□□ 1.67
GTF2A1-201ENST00000298173 OLFM2O95897 454 aa25.49■■□□□ 1.67
GTF2A1-201ENST00000298173 GABRR2P28476 465 aa25.49■■□□□ 1.67
GTF2A1-201ENST00000298173 COILP38432 576 aaPredicted RBP25.49■■□□□ 1.67
GTF2A1-201ENST00000298173 PLD5Q8N7P1 536 aa25.49■■□□□ 1.67
GTF2A1-201ENST00000298173 ATG4AQ8WYN0 398 aa25.49■■□□□ 1.67
GTF2A1-201ENST00000298173 NOTCH4Q99466 2003 aa25.49■■□□□ 1.67
GTF2A1-201ENST00000298173 AMACRQ9UHK6 382 aa25.49■■□□□ 1.67
GTF2A1-201ENST00000298173 H3BRJ5 948 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 APOC4-APOC2K7ER74 178 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 RFXAPO00287 272 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 APOC2P02655 101 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 POU2F2P09086 479 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 FNTAP49354 379 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 MLLT6P55198 1093 aaPredicted RBP25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 NRG1Q02297 640 aaPredicted RBP25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 DPYSQ14117 519 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 GPR161Q8N6U8 529 aaKnown RBP25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 TTC13Q8NBP0 860 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 ZDHHC7Q9NXF8 308 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 SAE1Q9UBE0 346 aaPredicted RBP25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 XPO7Q9UIA9 1087 aaKnown RBP25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 RAD51CO43502 376 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 CREB3O43889 395 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 RHOXF2BP0C7M4 288 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 AMPD1P23109 780 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 DYNLT1P63172 113 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 ELF2Q15723 593 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 C8orf74Q6P047 294 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 CCDC137Q6PK04 289 aaKnown RBP25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 CHRDL2Q6WN34 429 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 RFX8Q6ZV50 586 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 SLC35B2Q8TB61 432 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 MRPL38Q96DV4 380 aaKnown RBP25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 RHOXF2Q9BQY4 288 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 CORO1BQ9BR76 489 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 FRMD8P1Q9BZ68 369 aaPredicted RBP25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 ARHGEF4Q9NR80 690 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 HCFC1R1Q9NWW0 138 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 DNMT3BQ9UBC3 853 aaKnown RBP25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 SNX10Q9Y5X0 201 aa25.48■■□□□ 1.67
GTF2A1-201ENST00000298173 EEF2KO00418 725 aaKnown RBP25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 NRG2O14511 850 aaPredicted RBP25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 APOL1O14791 398 aa25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 PTPN2P17706 415 aa25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 TGM2P21980 687 aa25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 CDC25CP30307 473 aa25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 PTGIRP43119 386 aa25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 MRPS25P82663 173 aaKnown RBP25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 COG7P83436 770 aa25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 MANEALQ5VSG8 457 aa25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 CCDC26Q8TAB7 109 aa25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 ACTL9Q8TC94 416 aa25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 SLCO2A1Q92959 643 aa25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 BTN2A3PQ96KV6 586 aa25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 KLF16Q9BXK1 252 aaPredicted RBP25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 ASAH2Q9NR71 780 aa25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 DMGDHQ9UI17 866 aaKnown RBP25.47■■□□□ 1.67
GTF2A1-201ENST00000298173 HS3ST4Q9Y661 456 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms